RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MRPL23Q16540 153 aaKnown RBP9.14□□□□□ -0.95
CPNE4-201ENST00000429747 ODF3L2Q3SX64 289 aa9.14□□□□□ -0.95
CPNE4-201ENST00000429747 ATOX1O00244 68 aa9.14□□□□□ -0.95
CPNE4-201ENST00000429747 EPG5Q9HCE0 2579 aa9.14□□□□□ -0.95
CPNE4-201ENST00000429747 NCR3O14931 201 aa9.13□□□□□ -0.95
CPNE4-201ENST00000429747 SMIM1B2RUZ4 78 aa9.13□□□□□ -0.95
CPNE4-201ENST00000429747 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
CPNE4-201ENST00000429747 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
CPNE4-201ENST00000429747 WFDC11Q8NEX6 87 aa9.13□□□□□ -0.95
CPNE4-201ENST00000429747 TRBV6-8A0A0A6YYG3 113 aa9.12□□□□□ -0.95
CPNE4-201ENST00000429747 MUC4Q99102 2169 aa9.12□□□□□ -0.95
CPNE4-201ENST00000429747 DEFB135Q30KP9 77 aa9.12□□□□□ -0.95
CPNE4-201ENST00000429747 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
CPNE4-201ENST00000429747 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
CPNE4-201ENST00000429747 IBA57-AS1B1ANH7 110 aa9.1□□□□□ -0.95
CPNE4-201ENST00000429747 APOC4P55056 127 aa9.1□□□□□ -0.95
CPNE4-201ENST00000429747 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
CPNE4-201ENST00000429747 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
CPNE4-201ENST00000429747 TRBV6-4A0A1B0GX49 114 aa9.09□□□□□ -0.95
CPNE4-201ENST00000429747 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
CPNE4-201ENST00000429747 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.95
CPNE4-201ENST00000429747 KRTAP10-9P60411 292 aa9.09□□□□□ -0.95
CPNE4-201ENST00000429747 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
CPNE4-201ENST00000429747 KALRNO60229 2985 aa9.08□□□□□ -0.96
CPNE4-201ENST00000429747 KLK12Q9UKR0 248 aa9.08□□□□□ -0.96
CPNE4-201ENST00000429747 JMJD7-PLA2G4BH0Y9G9 81 aa9.08□□□□□ -0.96
CPNE4-201ENST00000429747 CCL18P55774 89 aa9.07□□□□□ -0.96
CPNE4-201ENST00000429747 Q6Q795 121 aa9.07□□□□□ -0.96
CPNE4-201ENST00000429747 LOC400499M0QZD8 3231 aa9.07□□□□□ -0.96
CPNE4-201ENST00000429747 UQCRQO14949 82 aa9.06□□□□□ -0.96
CPNE4-201ENST00000429747 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
CPNE4-201ENST00000429747 FAM240AA0A1B0GVK7 77 aa9.06□□□□□ -0.96
CPNE4-201ENST00000429747 BEAN1Q3B7T3 259 aa9.06□□□□□ -0.96
CPNE4-201ENST00000429747 TRAV23DV6A0A075B6W5 121 aa9.05□□□□□ -0.96
CPNE4-201ENST00000429747 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
CPNE4-201ENST00000429747 TMEM256-PLSCR3K7ERE1 68 aa9.05□□□□□ -0.96
CPNE4-201ENST00000429747 CFAP47Q6ZTR5 3102 aa9.05□□□□□ -0.96
CPNE4-201ENST00000429747 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
CPNE4-201ENST00000429747 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-201ENST00000429747 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 RBM3P98179 157 aaKnown RBP9.04□□□□□ -0.96
CPNE4-201ENST00000429747 FHL3Q13643 280 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 BBC3Q96PG8 261 aaPredicted RBP9.04□□□□□ -0.96
CPNE4-201ENST00000429747 hADV29S1A0JD25 119 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 REG3AQ06141 175 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 Q8N2B8 174 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 LINC01006Q8NI28 216 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
CPNE4-201ENST00000429747 CXCL5P42830 114 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 TACC2O95359 2948 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 SPART-AS1P0CW21 52 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 PLA2G2AP14555 144 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 C6orf99Q4VX62 202 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 DMXL2Q8TDJ6 3036 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 M0QXV9 152 aa9.03□□□□□ -0.96
CPNE4-201ENST00000429747 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.96
CPNE4-201ENST00000429747 DEFB105AQ8NG35 78 aa9.02□□□□□ -0.97
CPNE4-201ENST00000429747 J3KT08 172 aa9.02□□□□□ -0.97
CPNE4-201ENST00000429747 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
CPNE4-201ENST00000429747 A0A087WYN8 130 aa9.01□□□□□ -0.97
CPNE4-201ENST00000429747 LRRC75A-AS1Q8N1F1 130 aa9.01□□□□□ -0.97
CPNE4-201ENST00000429747 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
CPNE4-201ENST00000429747 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
CPNE4-201ENST00000429747 NTM-AS1Q6ZSK4 140 aa9□□□□□ -0.97
CPNE4-201ENST00000429747 RPL28P46779 137 aaKnown RBP9□□□□□ -0.97
CPNE4-201ENST00000429747 CITED1Q99966 193 aa9□□□□□ -0.97
CPNE4-201ENST00000429747 PRR3P79522 188 aaKnown RBP9□□□□□ -0.97
CPNE4-201ENST00000429747 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
CPNE4-201ENST00000429747 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
CPNE4-201ENST00000429747 ENHOQ6UWT2 76 aa8.99□□□□□ -0.97
CPNE4-201ENST00000429747 SOSTDC1Q6X4U4 206 aa8.99□□□□□ -0.97
CPNE4-201ENST00000429747 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
CPNE4-201ENST00000429747 LITAFQ99732 161 aa8.99□□□□□ -0.97
CPNE4-201ENST00000429747 WDFY3Q8IZQ1 3526 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
CPNE4-201ENST00000429747 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 A0A087WVE0 104 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 USP17L23D6RBM5 183 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
CPNE4-201ENST00000429747 FASNP49327 2511 aaKnown RBP8.97□□□□□ -0.97
CPNE4-201ENST00000429747 J3QKU1 62 aa8.97□□□□□ -0.97
CPNE4-201ENST00000429747 UPK3BQ9BT76 320 aa8.97□□□□□ -0.97
CPNE4-201ENST00000429747 A0A087WZ39 114 aa8.97□□□□□ -0.97
CPNE4-201ENST00000429747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
CPNE4-201ENST00000429747 WFDC9Q8NEX5 89 aa8.97□□□□□ -0.97
CPNE4-201ENST00000429747 ATMQ13315 3056 aa8.97□□□□□ -0.97
CPNE4-201ENST00000429747 COX7CP15954 63 aa8.96□□□□□ -0.97
CPNE4-201ENST00000429747 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
CPNE4-201ENST00000429747 FHL2Q14192 279 aa8.95□□□□□ -0.98
CPNE4-201ENST00000429747 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
CPNE4-201ENST00000429747 ZNF843Q8N446 348 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms