RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 Q6Q795 121 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 ABCA12Q86UK0 2595 aa8.14□□□□□ -1.11
LINC01238-203ENST00000429456 FAM240AA0A1B0GVK7 77 aa8.13□□□□□ -1.11
LINC01238-203ENST00000429456 CENPEQ02224 2701 aa8.13□□□□□ -1.11
LINC01238-203ENST00000429456 LOC100131303A0A0U1RQF7 123 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE7O76087 117 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE12FP0CL80 117 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE12GP0CL81 117 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 GAGE12IP0CL82 117 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
LINC01238-203ENST00000429456 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 OVOL2Q9BRP0 275 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
LINC01238-203ENST00000429456 CHD6Q8TD26 2715 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 WFDC10AQ9H1F0 79 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 C19orf73Q9NVV2 129 aa8.12□□□□□ -1.11
LINC01238-203ENST00000429456 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
LINC01238-203ENST00000429456 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
LINC01238-203ENST00000429456 CSNK1G2-AS1Q8NCQ2 148 aa8.11□□□□□ -1.11
LINC01238-203ENST00000429456 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
LINC01238-203ENST00000429456 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
LINC01238-203ENST00000429456 RPL35AP18077 110 aaKnown RBP8.11□□□□□ -1.11
LINC01238-203ENST00000429456 IGLV1-51P01701 117 aa8.1□□□□□ -1.11
LINC01238-203ENST00000429456 TRACP01848 142 aa8.1□□□□□ -1.11
LINC01238-203ENST00000429456 NDUFV3P56181 108 aaKnown RBP8.1□□□□□ -1.11
LINC01238-203ENST00000429456 LINC01006Q8NI28 216 aa8.1□□□□□ -1.11
LINC01238-203ENST00000429456 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
LINC01238-203ENST00000429456 C16orf95Q9H693 158 aa8.1□□□□□ -1.11
LINC01238-203ENST00000429456 SONP18583 2426 aaKnown RBP8.1□□□□□ -1.11
LINC01238-203ENST00000429456 NOTCH3Q9UM47 2321 aa8.09□□□□□ -1.11
LINC01238-203ENST00000429456 TRGV4A0A0C4DH28 118 aa8.09□□□□□ -1.11
LINC01238-203ENST00000429456 FHL2Q14192 279 aa8.08□□□□□ -1.12
LINC01238-203ENST00000429456 TTC32Q5I0X7 151 aa8.08□□□□□ -1.12
LINC01238-203ENST00000429456 PF4P02776 101 aa8.08□□□□□ -1.12
LINC01238-203ENST00000429456 PLA2G2AP14555 144 aa8.08□□□□□ -1.12
LINC01238-203ENST00000429456 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
LINC01238-203ENST00000429456 IGLV4-60A0A075B6I1 120 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 TRAV13-2A0A0B4J235 113 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
LINC01238-203ENST00000429456 ITPR3Q14573 2671 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 C2CD3Q4AC94 2353 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 HIST2H2BCQ6DN03 193 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 FAM218AQ96MZ4 157 aa8.07□□□□□ -1.12
LINC01238-203ENST00000429456 RPL28P46779 137 aaKnown RBP8.07□□□□□ -1.12
LINC01238-203ENST00000429456 IGHV3OR16-9A0A0B4J2B5 98 aa8.06□□□□□ -1.12
LINC01238-203ENST00000429456 ACYP1P07311 99 aa8.06□□□□□ -1.12
LINC01238-203ENST00000429456 KRTAP1-1Q07627 177 aa8.06□□□□□ -1.12
LINC01238-203ENST00000429456 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 IGKV3OR2-268A0A0C4DH90 116 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 BAALC-AS2P0C853 105 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 LINC00337Q8N6G1 96 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 APCP25054 2843 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 CRPP02741 224 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
LINC01238-203ENST00000429456 A0A087WZ39 114 aa8.04□□□□□ -1.12
LINC01238-203ENST00000429456 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
LINC01238-203ENST00000429456 ANK3Q12955 4377 aaKnown RBP8.04□□□□□ -1.12
LINC01238-203ENST00000429456 NBPF19A0A087WUL8 3843 aa8.04□□□□□ -1.12
LINC01238-203ENST00000429456 CUBNO60494 3623 aa8.03□□□□□ -1.12
LINC01238-203ENST00000429456 IBA57-AS1B1ANH7 110 aa8.03□□□□□ -1.12
LINC01238-203ENST00000429456 LINC00158P58513 81 aa8.03□□□□□ -1.12
LINC01238-203ENST00000429456 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
LINC01238-203ENST00000429456 CCL18P55774 89 aa8.03□□□□□ -1.12
LINC01238-203ENST00000429456 CCDC179H3BU77 68 aa8.02□□□□□ -1.13
LINC01238-203ENST00000429456 SETXQ7Z333 2677 aaKnown RBP8.02□□□□□ -1.13
LINC01238-203ENST00000429456 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 C5orf38Q86SI9 138 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 KIR2DL5BQ8NHK3 375 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 SMIM11BQ8TCY0 68 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 NF1P21359 2839 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 SEC61GP60059 68 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 Q9HAA7 133 aa8.01□□□□□ -1.13
LINC01238-203ENST00000429456 MALP21145 153 aa8□□□□□ -1.13
LINC01238-203ENST00000429456 FLNAP21333 2647 aaKnown RBP8□□□□□ -1.13
LINC01238-203ENST00000429456 CCDC168Q8NDH2 2452 aa8□□□□□ -1.13
LINC01238-203ENST00000429456 DEFB130BP0DP73 79 aa8□□□□□ -1.13
LINC01238-203ENST00000429456 DEFB130AP0DP74 79 aa8□□□□□ -1.13
LINC01238-203ENST00000429456 IMUPQ9GZP8 106 aa8□□□□□ -1.13
LINC01238-203ENST00000429456 INAFM2P0DMQ5 153 aa7.99□□□□□ -1.13
LINC01238-203ENST00000429456 LINC00643Q86TS7 51 aa7.99□□□□□ -1.13
LINC01238-203ENST00000429456 A0A087WYN8 130 aa7.98□□□□□ -1.13
LINC01238-203ENST00000429456 H0YGX0 51 aa7.98□□□□□ -1.13
LINC01238-203ENST00000429456 PFN2P35080 140 aa7.98□□□□□ -1.13
LINC01238-203ENST00000429456 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms