RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 Q9H8V8 135 aa8.18□□□□□ -1.1
UBR4-207ENST00000425413 FHL2Q14192 279 aa8.17□□□□□ -1.1
UBR4-207ENST00000425413 TRBV20-1A0A075B6N2 111 aa8.17□□□□□ -1.1
UBR4-207ENST00000425413 DEFB135Q30KP9 77 aa8.17□□□□□ -1.1
UBR4-207ENST00000425413 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
UBR4-207ENST00000425413 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 SPATA25Q9BR10 227 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 IGLV4-60A0A075B6I1 120 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 HERVK_113P63121 156 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 SBSPONQ8IVN8 264 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 ANKRD29Q8N6D5 301 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 OVOL2Q9BRP0 275 aa8.16□□□□□ -1.1
UBR4-207ENST00000425413 TRBV6-4A0A1B0GX49 114 aa8.15□□□□□ -1.1
UBR4-207ENST00000425413 TEN1Q86WV5 123 aa8.15□□□□□ -1.1
UBR4-207ENST00000425413 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
UBR4-207ENST00000425413 SLC25A20O43772 301 aa8.15□□□□□ -1.11
UBR4-207ENST00000425413 TIRAPP58753 221 aa8.15□□□□□ -1.11
UBR4-207ENST00000425413 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
UBR4-207ENST00000425413 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 PPDPFLQ8WWR9 84 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 GYPEP15421 78 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 MIAQ16674 131 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 CLPSL2Q6UWE3 100 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
UBR4-207ENST00000425413 A0A0B4J2C4 111 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 TMEM262E9PQX1 116 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 ATP6V0E2Q8NHE4 81 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 X6R8D5 127 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 TRBV6-8A0A0A6YYG3 113 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
UBR4-207ENST00000425413 STAB1Q9NY15 2570 aa8.12□□□□□ -1.11
UBR4-207ENST00000425413 NDUFA1O15239 70 aa8.12□□□□□ -1.11
UBR4-207ENST00000425413 TRIAP1O43715 76 aa8.12□□□□□ -1.11
UBR4-207ENST00000425413 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
UBR4-207ENST00000425413 C11orf68Q9H3H3 251 aaKnown RBP8.12□□□□□ -1.11
UBR4-207ENST00000425413 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
UBR4-207ENST00000425413 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
UBR4-207ENST00000425413 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
UBR4-207ENST00000425413 CSDC2Q9Y534 153 aaKnown RBP8.11□□□□□ -1.11
UBR4-207ENST00000425413 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
UBR4-207ENST00000425413 HTN3P15516 51 aa8.11□□□□□ -1.11
UBR4-207ENST00000425413 ATXN8Q156A1 80 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 SPANXDQ9BXN6 97 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 SPANXCQ9NY87 97 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 F5H768 121 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
UBR4-207ENST00000425413 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
UBR4-207ENST00000425413 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
UBR4-207ENST00000425413 XGP55808 180 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
UBR4-207ENST00000425413 CIDEAO60543 219 aa8.09□□□□□ -1.11
UBR4-207ENST00000425413 CLEC2BQ92478 149 aa8.09□□□□□ -1.11
UBR4-207ENST00000425413 MAST4O15021 2626 aa8.09□□□□□ -1.11
UBR4-207ENST00000425413 ICOSQ9Y6W8 199 aa8.09□□□□□ -1.11
UBR4-207ENST00000425413 SCGB1A1P11684 91 aa8.08□□□□□ -1.12
UBR4-207ENST00000425413 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
UBR4-207ENST00000425413 Q8N3U1 123 aa8.08□□□□□ -1.12
UBR4-207ENST00000425413 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
UBR4-207ENST00000425413 XCL1P47992 114 aa8.08□□□□□ -1.12
UBR4-207ENST00000425413 IGHV4-28A0A0C4DH34 117 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 PAX4O43316 350 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 KIR2DL5BQ8NHK3 375 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 TEX49A0A1B0GTD5 131 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 COX6CP09669 75 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 CKS1BP61024 79 aa8.07□□□□□ -1.12
UBR4-207ENST00000425413 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
UBR4-207ENST00000425413 PRO0255Q9UI72 69 aa8.06□□□□□ -1.12
UBR4-207ENST00000425413 C2orf82Q6UX34 121 aa8.06□□□□□ -1.12
UBR4-207ENST00000425413 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 DAD1P61803 113 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 COX7B2Q8TF08 81 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 IGLV10-54A0A075B6I4 117 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 PFN2P35080 140 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 CITED1Q99966 193 aa8.05□□□□□ -1.12
UBR4-207ENST00000425413 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 A0A1B0GV72 72 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 TIMM17BO60830 172 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 IFITM1P13164 125 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 LINC00158P58513 81 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 LINC00959A0A1B0GUT2 108 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
UBR4-207ENST00000425413 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
UBR4-207ENST00000425413 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
UBR4-207ENST00000425413 APOC4P55056 127 aa8.03□□□□□ -1.12
UBR4-207ENST00000425413 H7C423 109 aa8.03□□□□□ -1.12
UBR4-207ENST00000425413 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
UBR4-207ENST00000425413 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
UBR4-207ENST00000425413 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
UBR4-207ENST00000425413 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
UBR4-207ENST00000425413 RETNQ9HD89 108 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms