RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
PTCH1-206ENST00000421141 ANAPC13Q9BS18 74 aa7.78□□□□□ -1.16
PTCH1-206ENST00000421141 RNASE8Q8TDE3 154 aaKnown RBP7.78□□□□□ -1.16
PTCH1-206ENST00000421141 COX17Q14061 63 aa7.78□□□□□ -1.16
PTCH1-206ENST00000421141 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.16
PTCH1-206ENST00000421141 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
PTCH1-206ENST00000421141 ANKRD29Q8N6D5 301 aa7.77□□□□□ -1.17
PTCH1-206ENST00000421141 RNF185Q96GF1 192 aa7.77□□□□□ -1.17
PTCH1-206ENST00000421141 UBE2D3P61077 147 aa7.77□□□□□ -1.17
PTCH1-206ENST00000421141 UBE2D2P62837 147 aa7.77□□□□□ -1.17
PTCH1-206ENST00000421141 TSHBP01222 138 aa7.77□□□□□ -1.17
PTCH1-206ENST00000421141 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
PTCH1-206ENST00000421141 HIGD1BQ9P298 99 aa7.76□□□□□ -1.17
PTCH1-206ENST00000421141 H3BMG7 143 aa7.76□□□□□ -1.17
PTCH1-206ENST00000421141 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
PTCH1-206ENST00000421141 SPANXDQ9BXN6 97 aa7.76□□□□□ -1.17
PTCH1-206ENST00000421141 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 JMJD7-PLA2G4BH0Y9G9 81 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 NRACQ8N912 160 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 MRPS12O15235 138 aaKnown RBP7.75□□□□□ -1.17
PTCH1-206ENST00000421141 NREPQ16612 68 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 MGAQ8IWI9 3026 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 ANKRD39Q53RE8 183 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
PTCH1-206ENST00000421141 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 K7EP34 96 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 DLEU1O43261 78 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 C1orf158Q8N1D5 194 aa7.74□□□□□ -1.17
PTCH1-206ENST00000421141 FHL2Q14192 279 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 CFAP54Q96N23 3096 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 A0A0J9YXY3 114 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 PDE6GP18545 87 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 SZT2Q5T011 3432 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
PTCH1-206ENST00000421141 H0Y9J4 135 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 MUC7Q8TAX7 377 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 FSHBP01225 129 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 NUPR1O60356 82 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 VPS13AQ96RL7 3174 aa7.72□□□□□ -1.17
PTCH1-206ENST00000421141 IGKV2D-26A0A0A0MRZ7 120 aa7.71□□□□□ -1.17
PTCH1-206ENST00000421141 TRBV30A0A0K0K1B3 111 aa7.71□□□□□ -1.17
PTCH1-206ENST00000421141 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 TRAV23DV6A0A075B6W5 121 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 SPATA12Q7Z6I5 190 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 ACYP1P07311 99 aa7.71□□□□□ -1.18
PTCH1-206ENST00000421141 ZNF22P17026 224 aaPredicted RBP7.7□□□□□ -1.18
PTCH1-206ENST00000421141 K7EP13 123 aa7.7□□□□□ -1.18
PTCH1-206ENST00000421141 M0R378 163 aa7.7□□□□□ -1.18
PTCH1-206ENST00000421141 Q8IZM0 81 aa7.7□□□□□ -1.18
PTCH1-206ENST00000421141 DHRS4-AS1Q9P1J3 65 aa7.69□□□□□ -1.18
PTCH1-206ENST00000421141 POLR2KP53803 58 aaKnown RBP7.69□□□□□ -1.18
PTCH1-206ENST00000421141 SPATA3Q8NHX4 192 aa7.69□□□□□ -1.18
PTCH1-206ENST00000421141 F8WDY8 70 aa7.69□□□□□ -1.18
PTCH1-206ENST00000421141 LYPD5Q6UWN5 251 aa7.69□□□□□ -1.18
PTCH1-206ENST00000421141 MDFIQ99750 246 aa7.69□□□□□ -1.18
PTCH1-206ENST00000421141 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 SBSPONQ8IVN8 264 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 LINC00526Q96FQ7 95 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 PTH2Q96A98 100 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
PTCH1-206ENST00000421141 ETDBQ3ZM63 59 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 MAST4O15021 2626 aa7.68□□□□□ -1.18
PTCH1-206ENST00000421141 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
PTCH1-206ENST00000421141 WDFY4Q6ZS81 3184 aa7.67□□□□□ -1.18
PTCH1-206ENST00000421141 TIMM17BO60830 172 aa7.67□□□□□ -1.18
PTCH1-206ENST00000421141 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
PTCH1-206ENST00000421141 A0A096LNI7 61 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 DNAH14Q0VDD8 3507 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 USP17L23D6RBM5 183 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 LINC00308Q8TCZ7 52 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 NTN5Q8WTR8 489 aaPredicted RBP7.66□□□□□ -1.18
PTCH1-206ENST00000421141 A0A1B0GUV1 79 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 FXYD2P54710 66 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 A0A0B4J2C4 111 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 CYSRT1A8MQ03 144 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 UNC80Q8N2C7 3258 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 M0QXV9 152 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
PTCH1-206ENST00000421141 WWC2-AS2Q96NR7 200 aa7.65□□□□□ -1.18
PTCH1-206ENST00000421141 PCP4P48539 62 aa7.65□□□□□ -1.19
PTCH1-206ENST00000421141 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.19
PTCH1-206ENST00000421141 POM121L12Q8N7R1 296 aa7.65□□□□□ -1.19
PTCH1-206ENST00000421141 WFDC10BQ8IUB3 73 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 SPTBN5Q9NRC6 3674 aaKnown RBP7.64□□□□□ -1.19
PTCH1-206ENST00000421141 MP68P56378 58 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 COL6A3P12111 3177 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 BAHCC1Q9P281 2608 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 TTTY13Q9BZ97 58 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 SS18L2Q9UHA2 77 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 ATRQ13535 2644 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 EGFEM1PQ0D2K5 195 aa7.64□□□□□ -1.19
PTCH1-206ENST00000421141 A0A1B0GX51 115 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms