RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 UNQ6190/PRO20217Q6UXQ8 127 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 HEPN1Q6WQI6 88 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 LINC00322Q6ZN03 302 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 LINC00526Q96FQ7 95 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 TMEM141Q96I45 108 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 AQP10Q96PS8 301 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 WFDC6Q9BQY6 131 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 NMES1Q9C002 83 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 FXYD6Q9H0Q3 95 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 CMC2Q9NRP2 79 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 CACFD1Q9UGQ2 172 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 C5orf42Q9H799 3197 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 KNL1Q8NG31 2342 aa1.14□□□□□ -2.23
HMGB1P49-201ENST00000418882 UNC80Q8N2C7 3258 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 LAMA1P25391 3075 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 BRCA2P51587 3418 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRAV2A0A0B4J234 112 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 LOC101927531A0A1B0GV80 90 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 C7orf77A4D0Y5 90 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 SNCGO76070 127 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 IFNA17P01571 189 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 SNCAP37840 140 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 KRTAP10-4P60372 401 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 RBM3P98179 157 aaKnown RBP1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 HSD52Q0P140 79 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 C9orf116Q5BN46 136 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 NCMAPQ5T1S8 102 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 SPANXN1Q5VSR9 72 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 MRPL54Q6P161 138 aaKnown RBP1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 UNQ5815/PRO19632Q6UWF5 114 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 COMMD6Q7Z4G1 85 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 SBSPONQ8IVN8 264 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 PPP1R1CQ8WVI7 109 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 S100A16Q96FQ6 103 aaKnown RBP1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 S100A13Q99584 98 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 RPRMQ9NS64 109 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 FRYQ5TBA9 3013 aa1.13□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRANK1O15050 2925 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 MYO7AQ13402 2215 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 CHD7Q9P2D1 2997 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 RANBP2P49792 3224 aaKnown RBP1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 REV3LO60673 3130 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 MUC22E2RYF6 1773 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 COL6A3P12111 3177 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 NBDYA0A0U1RRE5 68 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 GYPBP06028 91 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 IFI6P09912 130 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 SFTA3P0C7M3 94 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 SPINT3P49223 89 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 FXYD4P59646 89 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 C9orf153Q5TBE3 101 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 LINC01590Q5TEZ4 76 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 SLC48A1Q6P1K1 146 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 PLPP5Q8NEB5 264 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 PPDPFLQ8WWR9 84 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 ATG5Q9H1Y0 275 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 ARFGEF3Q5TH69 2177 aa1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 ASCC3Q8N3C0 2202 aaKnown RBP1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 TNRC6AQ8NDV7 1962 aaKnown RBP1.12□□□□□ -2.23
HMGB1P49-201ENST00000418882 XIRP2A4UGR9 3374 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 LAMA3Q16787 3333 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 TNCP24821 2201 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 TNRC6BQ9UPQ9 1833 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRBV10-1A0A0K0K1A3 114 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 CPSF4LA6NMK7 179 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 UMAD1C9J7I0 102 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 H3BQ15 152 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 SFT2D2O95562 160 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 CYB5AP00167 134 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 HMGN2P05204 90 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 CCKP06307 115 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 RPL37AP61513 92 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 GDF5OSQ5U4N7 250 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 RPL7L1Q6DKI1 246 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 SPTSSBQ8NFR3 76 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 COPS9Q8WXC6 57 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 PRO1933Q9H354 126 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 MRPL35Q9NZE8 188 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 Q9Y3F1 56 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 V9GYS6 101 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 MED12Q93074 2177 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRIOO75962 3097 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 CFAP54Q96N23 3096 aa1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 MKI67P46013 3256 aaKnown RBP1.11□□□□□ -2.23
HMGB1P49-201ENST00000418882 DNAH14Q0VDD8 3507 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 NBEAQ8NFP9 2946 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 F5P12259 2224 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 KNTC1P50748 2209 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 ASXL3Q9C0F0 2248 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 FRYLO94915 3013 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRAV30A0A087WSZ9 112 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 A0A1B0GWA3 101 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 CLPSL1A2RUU4 121 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 TMEM14DPA8MWL7 114 aa1.1□□□□□ -2.23
HMGB1P49-201ENST00000418882 M0R143 59 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms