RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 HERVK_113P63121 156 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 SS18L2Q9UHA2 77 aa8.48□□□□□ -1.05
LIMK1-202ENST00000418310 NDUFA1O15239 70 aa8.47□□□□□ -1.05
LIMK1-202ENST00000418310 EDA2RQ9HAV5 297 aa8.47□□□□□ -1.05
LIMK1-202ENST00000418310 YAE1D1Q9NRH1 226 aa8.47□□□□□ -1.05
LIMK1-202ENST00000418310 CLPSL2Q6UWE3 100 aa8.47□□□□□ -1.05
LIMK1-202ENST00000418310 C15orf53Q8NAA6 179 aa8.47□□□□□ -1.05
LIMK1-202ENST00000418310 TMEM262E9PQX1 116 aa8.46□□□□□ -1.05
LIMK1-202ENST00000418310 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.05
LIMK1-202ENST00000418310 VWFP04275 2813 aa8.46□□□□□ -1.06
LIMK1-202ENST00000418310 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
LIMK1-202ENST00000418310 TIRAPP58753 221 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 GAGE2BQ13066 116 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 GAGE2EQ4V326 116 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 TMEM243Q9BU79 118 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 GAGE2DQ9UEU5 116 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 PFN2P35080 140 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
LIMK1-202ENST00000418310 LST1O00453 97 aa8.44□□□□□ -1.06
LIMK1-202ENST00000418310 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
LIMK1-202ENST00000418310 Q9HAA7 133 aa8.44□□□□□ -1.06
LIMK1-202ENST00000418310 GIG44P09565 113 aaPredicted RBP8.44□□□□□ -1.06
LIMK1-202ENST00000418310 LINC01006Q8NI28 216 aa8.44□□□□□ -1.06
LIMK1-202ENST00000418310 LINC00158P58513 81 aa8.43□□□□□ -1.06
LIMK1-202ENST00000418310 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
LIMK1-202ENST00000418310 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
LIMK1-202ENST00000418310 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
LIMK1-202ENST00000418310 IGLV5-45A0A087WSX0 123 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 IFITM1P13164 125 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 SMR3AQ99954 134 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 DEFB4AO15263 64 aa8.42□□□□□ -1.06
LIMK1-202ENST00000418310 UNC79Q9P2D8 2635 aa8.41□□□□□ -1.06
LIMK1-202ENST00000418310 B5MCH6 92 aa8.4□□□□□ -1.06
LIMK1-202ENST00000418310 F5H768 121 aa8.4□□□□□ -1.06
LIMK1-202ENST00000418310 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.06
LIMK1-202ENST00000418310 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.07
LIMK1-202ENST00000418310 CFAP161Q6P656 301 aa8.4□□□□□ -1.07
LIMK1-202ENST00000418310 C3orf56Q8N813 242 aa8.4□□□□□ -1.07
LIMK1-202ENST00000418310 PLAC8L1A1L4L8 177 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 IL17DQ8TAD2 202 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 H3BT86 120 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 TIMM17BO60830 172 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 XCL1P47992 114 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 CITED1Q99966 193 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 ATRQ13535 2644 aa8.39□□□□□ -1.07
LIMK1-202ENST00000418310 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 COX7A2LO14548 114 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 ATP5G1P05496 136 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 C16orf74Q96GX8 76 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
LIMK1-202ENST00000418310 CRPP02741 224 aa8.37□□□□□ -1.07
LIMK1-202ENST00000418310 BAALC-AS2P0C853 105 aa8.37□□□□□ -1.07
LIMK1-202ENST00000418310 NDUFV3P56181 108 aaKnown RBP8.37□□□□□ -1.07
LIMK1-202ENST00000418310 LRRC75A-AS1Q8N1F1 130 aa8.37□□□□□ -1.07
LIMK1-202ENST00000418310 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
LIMK1-202ENST00000418310 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 PAX4O43316 350 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 PDZD2O15018 2839 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
LIMK1-202ENST00000418310 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
LIMK1-202ENST00000418310 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 PF4P02776 101 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 GYPEP15421 78 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 FHL2Q14192 279 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 Q8N3U1 123 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 TENM1Q9UKZ4 2725 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
LIMK1-202ENST00000418310 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
LIMK1-202ENST00000418310 M0QXV9 152 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 IGLV1-51P01701 117 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 SLPIP03973 132 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 TMEM86BQ8N661 226 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 SPATA3Q8NHX4 192 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
LIMK1-202ENST00000418310 IGKV2-28A0A075B6P5 120 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 A0A087WYN8 130 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 IGKV2D-28P01615 120 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 HERV-K104P63124 156 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
LIMK1-202ENST00000418310 CCL18P55774 89 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 CSNK1G2-AS1Q8NCQ2 148 aa8.33□□□□□ -1.08
LIMK1-202ENST00000418310 HTN3P15516 51 aa8.32□□□□□ -1.08
LIMK1-202ENST00000418310 DNAL4O96015 105 aa8.32□□□□□ -1.08
LIMK1-202ENST00000418310 SMIM11BQ8TCY0 68 aa8.32□□□□□ -1.08
LIMK1-202ENST00000418310 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
LIMK1-202ENST00000418310 KRTAP1-1Q07627 177 aa8.31□□□□□ -1.08
LIMK1-202ENST00000418310 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
LIMK1-202ENST00000418310 SMCR5Q8TEV8 140 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms