RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 TINCRA0A1B0GVN0 87 aa12.53□□□□□ -0.4
RTN4R-202ENST00000416372 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
RTN4R-202ENST00000416372 A0A1B0GWB2 263 aa12.52□□□□□ -0.41
RTN4R-202ENST00000416372 RNF151Q2KHN1 245 aa12.52□□□□□ -0.41
RTN4R-202ENST00000416372 TMEM262E9PQX1 116 aa12.51□□□□□ -0.41
RTN4R-202ENST00000416372 H3BNG1 76 aa12.51□□□□□ -0.41
RTN4R-202ENST00000416372 GEMIN7Q9H840 131 aaKnown RBP12.51□□□□□ -0.41
RTN4R-202ENST00000416372 K7ERJ3 54 aa12.51□□□□□ -0.41
RTN4R-202ENST00000416372 PCP4P48539 62 aa12.51□□□□□ -0.41
RTN4R-202ENST00000416372 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
RTN4R-202ENST00000416372 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
RTN4R-202ENST00000416372 TRAV13-1A0A0B4J241 112 aa12.5□□□□□ -0.41
RTN4R-202ENST00000416372 TMEM223A0PJW6 202 aa12.5□□□□□ -0.41
RTN4R-202ENST00000416372 IGLL5B9A064 214 aa12.49□□□□□ -0.41
RTN4R-202ENST00000416372 TIRAPP58753 221 aa12.48□□□□□ -0.41
RTN4R-202ENST00000416372 VPS25Q9BRG1 176 aa12.48□□□□□ -0.41
RTN4R-202ENST00000416372 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
RTN4R-202ENST00000416372 HERVK_113P63121 156 aa12.47□□□□□ -0.41
RTN4R-202ENST00000416372 LINC00242Q5T6M2 205 aa12.47□□□□□ -0.41
RTN4R-202ENST00000416372 LELP1Q5T871 98 aa12.47□□□□□ -0.41
RTN4R-202ENST00000416372 A0A1B0GUV1 79 aa12.46□□□□□ -0.41
RTN4R-202ENST00000416372 FAM19A3Q7Z5A8 133 aa12.46□□□□□ -0.41
RTN4R-202ENST00000416372 IGHV3-64A0A075B6Q5 118 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 A6NJY4 79 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 LEPROTO15243 131 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 COX6A2Q02221 97 aa12.46□□□□□ -0.42
RTN4R-202ENST00000416372 LYPD5Q6UWN5 251 aa12.45□□□□□ -0.42
RTN4R-202ENST00000416372 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
RTN4R-202ENST00000416372 CDKN2A-AS1Q9UH64 79 aa12.45□□□□□ -0.42
RTN4R-202ENST00000416372 IGLV5-45A0A087WSX0 123 aa12.44□□□□□ -0.42
RTN4R-202ENST00000416372 TRAV10A0A0B4J240 114 aa12.44□□□□□ -0.42
RTN4R-202ENST00000416372 J3QQQ9 107 aa12.44□□□□□ -0.42
RTN4R-202ENST00000416372 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
RTN4R-202ENST00000416372 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
RTN4R-202ENST00000416372 TSPEAR-AS2P59090 65 aa12.43□□□□□ -0.42
RTN4R-202ENST00000416372 SPINK8P0C7L1 97 aa12.43□□□□□ -0.42
RTN4R-202ENST00000416372 SCGB1D4Q6XE38 83 aa12.43□□□□□ -0.42
RTN4R-202ENST00000416372 SPANXB1Q9NS25 103 aaPredicted RBP12.42□□□□□ -0.42
RTN4R-202ENST00000416372 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
RTN4R-202ENST00000416372 F8W1H4 67 aa12.41□□□□□ -0.42
RTN4R-202ENST00000416372 IGHV3-30-3P0DP02 117 aa12.41□□□□□ -0.42
RTN4R-202ENST00000416372 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
RTN4R-202ENST00000416372 LINC00959A0A1B0GUT2 108 aa12.39□□□□□ -0.43
RTN4R-202ENST00000416372 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
RTN4R-202ENST00000416372 Q8N3U1 123 aa12.39□□□□□ -0.43
RTN4R-202ENST00000416372 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
RTN4R-202ENST00000416372 CLPSL2Q6UWE3 100 aa12.38□□□□□ -0.43
RTN4R-202ENST00000416372 SS18Q15532 418 aa12.38□□□□□ -0.43
RTN4R-202ENST00000416372 LINC00269Q8N2A0 174 aa12.38□□□□□ -0.43
RTN4R-202ENST00000416372 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
RTN4R-202ENST00000416372 ESRGQ1W209 222 aa12.36□□□□□ -0.43
RTN4R-202ENST00000416372 SMIM1B2RUZ4 78 aa12.35□□□□□ -0.43
RTN4R-202ENST00000416372 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
RTN4R-202ENST00000416372 IGLV5-39A0A0G2JS06 123 aa12.35□□□□□ -0.43
RTN4R-202ENST00000416372 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
RTN4R-202ENST00000416372 REG3AQ06141 175 aa12.34□□□□□ -0.43
RTN4R-202ENST00000416372 LYRM7Q5U5X0 104 aa12.34□□□□□ -0.43
RTN4R-202ENST00000416372 IGHV3OR16-9A0A0B4J2B5 98 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 NHLRC4P0CG21 123 aaPredicted RBP12.33□□□□□ -0.44
RTN4R-202ENST00000416372 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
RTN4R-202ENST00000416372 WFDC10BQ8IUB3 73 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 HUWE1Q7Z6Z7 4374 aaKnown RBP12.33□□□□□ -0.44
RTN4R-202ENST00000416372 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 XCL1P47992 114 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
RTN4R-202ENST00000416372 H3BMG7 143 aa12.32□□□□□ -0.44
RTN4R-202ENST00000416372 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
RTN4R-202ENST00000416372 KLK12Q9UKR0 248 aa12.32□□□□□ -0.44
RTN4R-202ENST00000416372 J3QR89 54 aa12.31□□□□□ -0.44
RTN4R-202ENST00000416372 A0A087WZ39 114 aa12.3□□□□□ -0.44
RTN4R-202ENST00000416372 TSPAN13O95857 204 aa12.3□□□□□ -0.44
RTN4R-202ENST00000416372 WFDC2Q14508 124 aa12.3□□□□□ -0.44
RTN4R-202ENST00000416372 C5orf38Q86SI9 138 aa12.3□□□□□ -0.44
RTN4R-202ENST00000416372 C10orf126Q8N4M7 172 aa12.3□□□□□ -0.44
RTN4R-202ENST00000416372 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
RTN4R-202ENST00000416372 A0A0J9YXY3 114 aa12.29□□□□□ -0.44
RTN4R-202ENST00000416372 CHCHD10Q8WYQ3 142 aaPredicted RBP12.29□□□□□ -0.44
RTN4R-202ENST00000416372 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
RTN4R-202ENST00000416372 NDUFA1O15239 70 aa12.28□□□□□ -0.44
RTN4R-202ENST00000416372 CD164L2Q6UWJ8 174 aa12.28□□□□□ -0.44
RTN4R-202ENST00000416372 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
RTN4R-202ENST00000416372 APOMO95445 188 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 CRPP02741 224 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 CFC1P0CG37 223 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 Q9H8V8 135 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 TOMM7Q9P0U1 55 aa12.26□□□□□ -0.45
RTN4R-202ENST00000416372 TMEM238C9JI98 176 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 TRBV20-1A0A075B6N2 111 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 COX7A2LO14548 114 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 UBE2WQ96B02 151 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 PRO1854Q9UHT4 67 aa12.25□□□□□ -0.45
RTN4R-202ENST00000416372 CCL18P55774 89 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms