RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
SCN1B-202ENST00000415950 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
SCN1B-202ENST00000415950 H0Y9J4 135 aa9.56□□□□□ -0.88
SCN1B-202ENST00000415950 TSPEAR-AS2P59090 65 aa9.56□□□□□ -0.88
SCN1B-202ENST00000415950 MRGPRG-AS1Q2M3A8 158 aa9.55□□□□□ -0.88
SCN1B-202ENST00000415950 ZMAT4Q9H898 229 aa9.55□□□□□ -0.88
SCN1B-202ENST00000415950 UBE2AP49459 152 aa9.55□□□□□ -0.88
SCN1B-202ENST00000415950 CXCL5P42830 114 aa9.55□□□□□ -0.88
SCN1B-202ENST00000415950 DCANP1Q8TF63 244 aa9.55□□□□□ -0.88
SCN1B-202ENST00000415950 C6orf99Q4VX62 202 aa9.54□□□□□ -0.88
SCN1B-202ENST00000415950 KALRNO60229 2985 aa9.54□□□□□ -0.88
SCN1B-202ENST00000415950 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
SCN1B-202ENST00000415950 NDUFA7O95182 113 aa9.53□□□□□ -0.88
SCN1B-202ENST00000415950 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
SCN1B-202ENST00000415950 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
SCN1B-202ENST00000415950 REG3AQ06141 175 aa9.53□□□□□ -0.88
SCN1B-202ENST00000415950 FAM222AQ5U5X8 452 aa9.53□□□□□ -0.88
SCN1B-202ENST00000415950 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.88
SCN1B-202ENST00000415950 EBI3Q14213 229 aa9.52□□□□□ -0.88
SCN1B-202ENST00000415950 ATRQ13535 2644 aa9.52□□□□□ -0.89
SCN1B-202ENST00000415950 POM121L12Q8N7R1 296 aa9.52□□□□□ -0.89
SCN1B-202ENST00000415950 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
SCN1B-202ENST00000415950 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
SCN1B-202ENST00000415950 PRR4Q16378 134 aa9.52□□□□□ -0.89
SCN1B-202ENST00000415950 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
SCN1B-202ENST00000415950 CRYGDP07320 174 aa9.51□□□□□ -0.89
SCN1B-202ENST00000415950 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
SCN1B-202ENST00000415950 ADGRG4Q8IZF6 3080 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 SNURFQ9Y675 71 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 FAM236DA0A1B0GTK5 79 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 FAM236CP0DP71 79 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 Q8N6K4 173 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 TSHBP01222 138 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 C1orf158Q8N1D5 194 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
SCN1B-202ENST00000415950 UBE2D1P51668 147 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 PDE6GP18545 87 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 C3orf84H3BNL1 204 aa9.49□□□□□ -0.89
SCN1B-202ENST00000415950 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 IGKV4-1P06312 121 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 A0A1W2PPR1 153 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 DMXL2Q8TDJ6 3036 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 C18orf65Q6ZTR6 163 aa9.48□□□□□ -0.89
SCN1B-202ENST00000415950 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 Q6ZQY7 126 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 CHD6Q8TD26 2715 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 DNAJC9-AS1A6NH13 148 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 CCKP06307 115 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 REV3LO60673 3130 aa9.47□□□□□ -0.89
SCN1B-202ENST00000415950 H7C423 109 aa9.46□□□□□ -0.89
SCN1B-202ENST00000415950 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.89
SCN1B-202ENST00000415950 IBA57-AS1B1ANH7 110 aa9.46□□□□□ -0.89
SCN1B-202ENST00000415950 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.9
SCN1B-202ENST00000415950 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
SCN1B-202ENST00000415950 COL5A1P20908 1838 aaPredicted RBP9.46□□□□□ -0.9
SCN1B-202ENST00000415950 A0A0J9YWU9 116 aa9.46□□□□□ -0.9
SCN1B-202ENST00000415950 ADAMTSL4-AS1Q5T5F5 129 aa9.46□□□□□ -0.9
SCN1B-202ENST00000415950 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
SCN1B-202ENST00000415950 LST1O00453 97 aa9.45□□□□□ -0.9
SCN1B-202ENST00000415950 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
SCN1B-202ENST00000415950 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 KLLNB2CW77 178 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 H3BQ85 93 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 AVPP01185 164 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 C11orf71Q6IPW1 123 aa9.44□□□□□ -0.9
SCN1B-202ENST00000415950 ODF3Q96PU9 254 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 TACC2O95359 2948 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-202ENST00000415950 UBE2D3P61077 147 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 UBE2D2P62837 147 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 SERP2Q8N6R1 65 aa9.43□□□□□ -0.9
SCN1B-202ENST00000415950 BBC3Q96PG8 261 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-202ENST00000415950 SMIM11BQ8TCY0 68 aa9.42□□□□□ -0.9
SCN1B-202ENST00000415950 PSMG3-AS1Q96PY0 264 aa9.41□□□□□ -0.9
SCN1B-202ENST00000415950 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
SCN1B-202ENST00000415950 A0A087WVE0 104 aa9.4□□□□□ -0.9
SCN1B-202ENST00000415950 FAM19A1Q7Z5A9 133 aa9.4□□□□□ -0.9
SCN1B-202ENST00000415950 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
SCN1B-202ENST00000415950 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.9
SCN1B-202ENST00000415950 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.91
SCN1B-202ENST00000415950 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.91
SCN1B-202ENST00000415950 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
SCN1B-202ENST00000415950 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
SCN1B-202ENST00000415950 KLK5Q9Y337 293 aaPredicted RBP9.39□□□□□ -0.91
SCN1B-202ENST00000415950 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
SCN1B-202ENST00000415950 COX7CP15954 63 aa9.39□□□□□ -0.91
SCN1B-202ENST00000415950 Q9UF83 564 aa9.39□□□□□ -0.91
SCN1B-202ENST00000415950 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
SCN1B-202ENST00000415950 A0A087WZ39 114 aa9.38□□□□□ -0.91
SCN1B-202ENST00000415950 LRCOL1A6NCL2 159 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms