RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 E9PLD3 99 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 TRBV10-1A0A0K0K1A3 114 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 FHL3Q13643 280 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 GDF5OSQ5U4N7 250 aa6.31□□□□□ -1.4
SYNE1-211ENST00000413186 LINC00322Q6ZN03 302 aaPredicted RBP6.31□□□□□ -1.4
SYNE1-211ENST00000413186 TRBV27A0A0K0K1C4 114 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 IGLV2-11P01706 119 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 EDN2P20800 178 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
SYNE1-211ENST00000413186 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
SYNE1-211ENST00000413186 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
SYNE1-211ENST00000413186 RMI2Q96E14 147 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 PRO0255Q9UI72 69 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 GYPEP15421 78 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 ATP6V0E2Q8NHE4 81 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 A0A0J9YY99 117 aa6.3□□□□□ -1.4
SYNE1-211ENST00000413186 KLK5Q9Y337 293 aaPredicted RBP6.3□□□□□ -1.4
SYNE1-211ENST00000413186 CCL18P55774 89 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 CEND1Q8N111 149 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 Q6Q795 121 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 TDRG1Q3Y452 100 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 HIGD1BQ9P298 99 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 U3KQK5 164 aa6.29□□□□□ -1.4
SYNE1-211ENST00000413186 IGHV3-38A0A0C4DH36 116 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 BVES-AS1Q5T3Y7 98 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 X6R8D5 127 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 UNC79Q9P2D8 2635 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 TRBV7-3A0A075B6L6 115 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 SPAG11BQ08648 103 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 BPY2O14599 106 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 PSPHP1O15172 72 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 FRMD6-AS1P0C7T7 363 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 TOMM6Q96B49 74 aa6.28□□□□□ -1.4
SYNE1-211ENST00000413186 ASH1LQ9NR48 2969 aaKnown RBP6.27□□□□□ -1.4
SYNE1-211ENST00000413186 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 DEFB4AO15263 64 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 WFDC10AQ9H1F0 79 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 CNFNQ9BYD5 112 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 CFC1BP0CG36 223 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 CFC1P0CG37 223 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 CRIP1P50238 77 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 Q6ZTI0 123 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
SYNE1-211ENST00000413186 PIK3CD-AS1Q5SR53 167 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 RBX1P62877 108 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 UPK3BQ9BT76 320 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 TP53TG3Q9ULZ0 132 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 CELA1Q9UNI1 258 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 A0A096LPF7 62 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 IGKV2D-26A0A0A0MRZ7 120 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 J3QQQ9 107 aa6.26□□□□□ -1.41
SYNE1-211ENST00000413186 RNASE8Q8TDE3 154 aaKnown RBP6.26□□□□□ -1.41
SYNE1-211ENST00000413186 RPL39LQ96EH5 51 aaKnown RBP6.25□□□□□ -1.41
SYNE1-211ENST00000413186 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
SYNE1-211ENST00000413186 ANGP03950 147 aaKnown RBP6.25□□□□□ -1.41
SYNE1-211ENST00000413186 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 WFDC10BQ8IUB3 73 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 CELSR1Q9NYQ6 3014 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 BEAN1Q3B7T3 259 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 Q6ZVH6 145 aa6.25□□□□□ -1.41
SYNE1-211ENST00000413186 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
SYNE1-211ENST00000413186 FOXI1Q12951 378 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 A0A096LNI7 61 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 ODF1Q14990 250 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 PRR9Q5T870 116 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 TM2D2Q9BX73 214 aa6.24□□□□□ -1.41
SYNE1-211ENST00000413186 C12orf74Q32Q52 190 aa6.23□□□□□ -1.41
SYNE1-211ENST00000413186 TRBV6-4A0A1B0GX49 114 aa6.23□□□□□ -1.41
SYNE1-211ENST00000413186 SCXQ7RTU7 201 aa6.23□□□□□ -1.41
SYNE1-211ENST00000413186 C9orf85Q96MD7 179 aa6.23□□□□□ -1.41
SYNE1-211ENST00000413186 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
SYNE1-211ENST00000413186 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 TRBV10-2A0A0K0K1G8 114 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
SYNE1-211ENST00000413186 WFDC2Q14508 124 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 MRPS36P82909 103 aaKnown RBP6.22□□□□□ -1.41
SYNE1-211ENST00000413186 BAHCC1Q9P281 2608 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 FLNCQ14315 2725 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 CFAP126Q5VTH2 177 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
SYNE1-211ENST00000413186 C20orf203Q8NBC4 194 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms