RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
CLTCL1-201ENST00000412649 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
CLTCL1-201ENST00000412649 IGLV10-54A0A075B6I4 117 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 J3QLI3 93 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 BRI3O95415 125 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 HILS1P60008 231 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 DAD1P61803 113 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 C6orf99Q4VX62 202 aa10.01□□□□□ -0.81
CLTCL1-201ENST00000412649 MUC4Q99102 2169 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 J3QKU1 62 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 FAM19A1Q7Z5A9 133 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 CDH23Q9H251 3354 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
CLTCL1-201ENST00000412649 F8WEM9 126 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 GYPEP15421 78 aa10□□□□□ -0.81
CLTCL1-201ENST00000412649 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 TRBV6-4A0A1B0GX49 114 aa9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 COL27A1Q8IZC6 1860 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 NOTCH2Q04721 2471 aa9.99□□□□□ -0.81
CLTCL1-201ENST00000412649 NREPQ16612 68 aa9.98□□□□□ -0.81
CLTCL1-201ENST00000412649 V9GYY9 64 aa9.98□□□□□ -0.81
CLTCL1-201ENST00000412649 FAM208BQ5VWN6 2430 aa9.98□□□□□ -0.81
CLTCL1-201ENST00000412649 ZNF561-AS1K7EIQ3 104 aa9.97□□□□□ -0.81
CLTCL1-201ENST00000412649 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.81
CLTCL1-201ENST00000412649 Q8N814 137 aa9.96□□□□□ -0.81
CLTCL1-201ENST00000412649 DIRC1Q969H9 104 aa9.96□□□□□ -0.81
CLTCL1-201ENST00000412649 PRO0628Q9UI54 55 aa9.96□□□□□ -0.81
CLTCL1-201ENST00000412649 ACACBO00763 2458 aa9.96□□□□□ -0.82
CLTCL1-201ENST00000412649 MYO9AB2RTY4 2548 aa9.96□□□□□ -0.82
CLTCL1-201ENST00000412649 CDSNQ15517 529 aa9.95□□□□□ -0.82
CLTCL1-201ENST00000412649 Q9UF83 564 aa9.95□□□□□ -0.82
CLTCL1-201ENST00000412649 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLTCL1-201ENST00000412649 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
CLTCL1-201ENST00000412649 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
CLTCL1-201ENST00000412649 BEAN1Q3B7T3 259 aa9.94□□□□□ -0.82
CLTCL1-201ENST00000412649 C1orf195Q5TG92 126 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 TRIOO75962 3097 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 CCL24O00175 119 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 NTM-AS1Q6ZSK4 140 aa9.93□□□□□ -0.82
CLTCL1-201ENST00000412649 SPAG11BQ08648 103 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 LAMA1P25391 3075 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 LOC100131303A0A0U1RQF7 123 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 MIFP14174 115 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 NBEAQ8NFP9 2946 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 TRBV10-3A0A0K0K1G6 114 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 Q6ZQY7 126 aa9.92□□□□□ -0.82
CLTCL1-201ENST00000412649 PTPN13Q12923 2485 aa9.91□□□□□ -0.82
CLTCL1-201ENST00000412649 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
CLTCL1-201ENST00000412649 HIGD2BQ4VC39 106 aa9.91□□□□□ -0.82
CLTCL1-201ENST00000412649 A0A087WZ39 114 aa9.91□□□□□ -0.82
CLTCL1-201ENST00000412649 COX7BP24311 80 aa9.91□□□□□ -0.82
CLTCL1-201ENST00000412649 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
CLTCL1-201ENST00000412649 FHL2Q14192 279 aa9.9□□□□□ -0.83
CLTCL1-201ENST00000412649 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
CLTCL1-201ENST00000412649 RMI2Q96E14 147 aa9.89□□□□□ -0.83
CLTCL1-201ENST00000412649 BPY2O14599 106 aa9.89□□□□□ -0.83
CLTCL1-201ENST00000412649 LINC01561Q8N1V8 128 aa9.89□□□□□ -0.83
CLTCL1-201ENST00000412649 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.89□□□□□ -0.83
CLTCL1-201ENST00000412649 VCANP13611 3396 aa9.88□□□□□ -0.83
CLTCL1-201ENST00000412649 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-201ENST00000412649 Q8IZM0 81 aa9.88□□□□□ -0.83
CLTCL1-201ENST00000412649 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
CLTCL1-201ENST00000412649 Q8N3U1 123 aa9.88□□□□□ -0.83
CLTCL1-201ENST00000412649 IGHV4-28A0A0C4DH34 117 aa9.87□□□□□ -0.83
CLTCL1-201ENST00000412649 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
CLTCL1-201ENST00000412649 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-201ENST00000412649 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
CLTCL1-201ENST00000412649 A0A1W2PPR1 153 aa9.87□□□□□ -0.83
CLTCL1-201ENST00000412649 C11orf72Q8NBR9 251 aa9.86□□□□□ -0.83
CLTCL1-201ENST00000412649 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
CLTCL1-201ENST00000412649 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
CLTCL1-201ENST00000412649 IGF2RP11717 2491 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 LINC01547P58512 204 aaPredicted RBP9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 C18orf65Q6ZTR6 163 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 COX17Q14061 63 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 Q6ZVQ6 151 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 CEP295Q9C0D2 2601 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 TRBV7-6A0A0J9YX20 115 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 FAM19A3Q7Z5A8 133 aa9.85□□□□□ -0.83
CLTCL1-201ENST00000412649 C19orf84I3L1E1 186 aa9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 REG3AQ06141 175 aa9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 ANKRD11Q6UB99 2663 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 BCE1O60756 84 aa9.84□□□□□ -0.83
CLTCL1-201ENST00000412649 VPS13AQ96RL7 3174 aa9.83□□□□□ -0.84
CLTCL1-201ENST00000412649 C1orf158Q8N1D5 194 aa9.83□□□□□ -0.84
CLTCL1-201ENST00000412649 ZNF702PQ9H963 129 aa9.83□□□□□ -0.84
CLTCL1-201ENST00000412649 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
CLTCL1-201ENST00000412649 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
CLTCL1-201ENST00000412649 WIPF1O43516 503 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 AVPP01185 164 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 ODF3L2Q3SX64 289 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 Q6YL49 198 aa9.81□□□□□ -0.84
CLTCL1-201ENST00000412649 ZNF843Q8N446 348 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms