RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
HLA-B-249ENST00000412585 UBE2D3P61077 147 aa11.53□□□□□ -0.56
HLA-B-249ENST00000412585 UBE2D2P62837 147 aa11.53□□□□□ -0.56
HLA-B-249ENST00000412585 CASC10Q5T4H9 136 aa11.53□□□□□ -0.56
HLA-B-249ENST00000412585 DNAH7Q8WXX0 4024 aa11.53□□□□□ -0.56
HLA-B-249ENST00000412585 A0A0J9YXV3 536 aa11.52□□□□□ -0.57
HLA-B-249ENST00000412585 TMEM238LA0A1B0GVL6 79 aa11.52□□□□□ -0.57
HLA-B-249ENST00000412585 A6NJY4 79 aa11.52□□□□□ -0.57
HLA-B-249ENST00000412585 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
HLA-B-249ENST00000412585 DAZ4Q86SG3 579 aaKnown RBP11.52□□□□□ -0.57
HLA-B-249ENST00000412585 DAZ3Q9NR90 486 aaKnown RBP11.52□□□□□ -0.57
HLA-B-249ENST00000412585 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
HLA-B-249ENST00000412585 RBX1P62877 108 aa11.51□□□□□ -0.57
HLA-B-249ENST00000412585 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 COTL1Q14019 142 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 IGHV3-38A0A0C4DH36 116 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 IGHV3-30P01768 117 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 IGHV3-30-5P0DP03 117 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 LGALS3P17931 250 aaKnown RBP11.5□□□□□ -0.57
HLA-B-249ENST00000412585 CCL18P55774 89 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 OCIAD2Q56VL3 154 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
HLA-B-249ENST00000412585 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
HLA-B-249ENST00000412585 IGLV5-45A0A087WSX0 123 aa11.48□□□□□ -0.57
HLA-B-249ENST00000412585 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
HLA-B-249ENST00000412585 TIRAPP58753 221 aa11.47□□□□□ -0.57
HLA-B-249ENST00000412585 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
HLA-B-249ENST00000412585 Q6ZUT4 128 aa11.47□□□□□ -0.57
HLA-B-249ENST00000412585 CSDC2Q9Y534 153 aaKnown RBP11.47□□□□□ -0.57
HLA-B-249ENST00000412585 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.57
HLA-B-249ENST00000412585 CSMD3Q7Z407 3707 aa11.46□□□□□ -0.57
HLA-B-249ENST00000412585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
HLA-B-249ENST00000412585 IGHV1-58A0A0C4DH39 117 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
HLA-B-249ENST00000412585 ESRGQ1W209 222 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 IGHV3-30-3P0DP02 117 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 LELP1Q5T871 98 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 NTM-AS1Q6ZSK4 140 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
HLA-B-249ENST00000412585 TENM2Q9NT68 2774 aa11.44□□□□□ -0.58
HLA-B-249ENST00000412585 CBY1Q9Y3M2 126 aa11.44□□□□□ -0.58
HLA-B-249ENST00000412585 STARD9Q9P2P6 4700 aa11.43□□□□□ -0.58
HLA-B-249ENST00000412585 TRBV6-8A0A0A6YYG3 113 aa11.43□□□□□ -0.58
HLA-B-249ENST00000412585 A0A0J9YXY3 114 aa11.42□□□□□ -0.58
HLA-B-249ENST00000412585 LITAFQ99732 161 aa11.42□□□□□ -0.58
HLA-B-249ENST00000412585 LINC00588Q9Y4M8 146 aa11.42□□□□□ -0.58
HLA-B-249ENST00000412585 DYNC2H1Q8NCM8 4307 aaKnown RBP11.42□□□□□ -0.58
HLA-B-249ENST00000412585 K7ERU9 68 aa11.41□□□□□ -0.58
HLA-B-249ENST00000412585 TSPAN13O95857 204 aa11.41□□□□□ -0.58
HLA-B-249ENST00000412585 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
HLA-B-249ENST00000412585 TMEM238C9JI98 176 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 CFC1BP0CG36 223 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 CFC1P0CG37 223 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 SMAGPQ0VAQ4 97 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 TMEM243Q9BU79 118 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
HLA-B-249ENST00000412585 A0A0B4J2C4 111 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 F8W1H4 67 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 H7C423 109 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 UBE2L6O14933 153 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.59
HLA-B-249ENST00000412585 CHCHD5Q9BSY4 110 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 UPK3BQ9BT76 320 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 SPANXCQ9NY87 97 aa11.4□□□□□ -0.59
HLA-B-249ENST00000412585 TRAV8-3A0A0A6YYJ7 113 aa11.39□□□□□ -0.59
HLA-B-249ENST00000412585 IGLV5-39A0A0G2JS06 123 aa11.39□□□□□ -0.59
HLA-B-249ENST00000412585 TIMM17BO60830 172 aa11.39□□□□□ -0.59
HLA-B-249ENST00000412585 EIF4EBP3O60516 100 aaPredicted RBP11.38□□□□□ -0.59
HLA-B-249ENST00000412585 IGHV3-64A0A075B6Q5 118 aa11.37□□□□□ -0.59
HLA-B-249ENST00000412585 HERVK_113P63121 156 aa11.37□□□□□ -0.59
HLA-B-249ENST00000412585 RPL24P83731 157 aaKnown RBP11.37□□□□□ -0.59
HLA-B-249ENST00000412585 LINC00476Q8WZB0 136 aa11.37□□□□□ -0.59
HLA-B-249ENST00000412585 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
HLA-B-249ENST00000412585 A4D1N5 150 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 LY6G6CO95867 125 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 CDKN2A-AS1Q9UH64 79 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 NDUFA12Q9UI09 145 aa11.36□□□□□ -0.59
HLA-B-249ENST00000412585 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 APOMO95445 188 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 DGAT2L7PQ6IED9 249 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 PRO1854Q9UHT4 67 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 H3BMG7 143 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 NDUFA1O15239 70 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 SPINK8P0C7L1 97 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 GAGE6Q13070 117 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
HLA-B-249ENST00000412585 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-249ENST00000412585 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
HLA-B-249ENST00000412585 COX6A2Q02221 97 aa11.34□□□□□ -0.59
HLA-B-249ENST00000412585 PLECQ15149 4684 aaKnown RBP11.34□□□□□ -0.59
HLA-B-249ENST00000412585 TMEM101Q96IK0 257 aa11.34□□□□□ -0.59
HLA-B-249ENST00000412585 Q9H8V8 135 aa11.34□□□□□ -0.59
HLA-B-249ENST00000412585 MIAQ16674 131 aa11.33□□□□□ -0.6
HLA-B-249ENST00000412585 DNAH10OSP0CZ25 163 aa11.32□□□□□ -0.6
HLA-B-249ENST00000412585 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms