RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 HERV-K104P63124 156 aa8.16□□□□□ -1.1
PTPRF-204ENST00000412568 IGHV1-58A0A0C4DH39 117 aa8.16□□□□□ -1.1
PTPRF-204ENST00000412568 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
PTPRF-204ENST00000412568 H3BT86 120 aa8.16□□□□□ -1.1
PTPRF-204ENST00000412568 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
PTPRF-204ENST00000412568 RBMY1FQ15415 496 aaKnown RBP8.16□□□□□ -1.1
PTPRF-204ENST00000412568 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
PTPRF-204ENST00000412568 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
PTPRF-204ENST00000412568 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
PTPRF-204ENST00000412568 SPANXDQ9BXN6 97 aa8.15□□□□□ -1.1
PTPRF-204ENST00000412568 A0A0B4J2C4 111 aa8.15□□□□□ -1.11
PTPRF-204ENST00000412568 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.11
PTPRF-204ENST00000412568 NDUFA7O95182 113 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 TSHBP01222 138 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 DSCR8Q96T75 97 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 COX7A2LO14548 114 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 ITPR1Q14643 2758 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 CLUHP3Q96NS8 147 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 A0A0J9YXY3 114 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 LECT2O14960 151 aa8.14□□□□□ -1.11
PTPRF-204ENST00000412568 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
PTPRF-204ENST00000412568 RPL32P62910 135 aaKnown RBP8.13□□□□□ -1.11
PTPRF-204ENST00000412568 C1orf158Q8N1D5 194 aa8.13□□□□□ -1.11
PTPRF-204ENST00000412568 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
PTPRF-204ENST00000412568 UBR5O95071 2799 aaPredicted RBP8.13□□□□□ -1.11
PTPRF-204ENST00000412568 STAB1Q9NY15 2570 aa8.13□□□□□ -1.11
PTPRF-204ENST00000412568 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
PTPRF-204ENST00000412568 IGHV4-28A0A0C4DH34 117 aa8.12□□□□□ -1.11
PTPRF-204ENST00000412568 ATOX1O00244 68 aa8.12□□□□□ -1.11
PTPRF-204ENST00000412568 IGLV2-18A0A075B6J9 118 aa8.12□□□□□ -1.11
PTPRF-204ENST00000412568 NFE4Q86UQ8 179 aa8.12□□□□□ -1.11
PTPRF-204ENST00000412568 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
PTPRF-204ENST00000412568 DMDP11532 3685 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 TMEM223A0PJW6 202 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 IGIPA6NJ69 53 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 H0YGX0 51 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 BRI3O95415 125 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 XGP55808 180 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 Q6ZSN1 163 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 C11orf45Q8TAV5 145 aa8.11□□□□□ -1.11
PTPRF-204ENST00000412568 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 RETNQ9HD89 108 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 LAMA5O15230 3695 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 IGHV4-30-4P0DP06 118 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 CCL18P55774 89 aa8.1□□□□□ -1.11
PTPRF-204ENST00000412568 COL6A5A8TX70 2615 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 J3KT08 172 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 NKAPP1Q8N9T2 125 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 F8WEM9 126 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 C14orf132Q9NPU4 83 aa8.09□□□□□ -1.11
PTPRF-204ENST00000412568 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 TRIAP1O43715 76 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 Q9UF83 564 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 MIAQ16674 131 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
PTPRF-204ENST00000412568 REG3AQ06141 175 aa8.07□□□□□ -1.12
PTPRF-204ENST00000412568 TRBV6-4A0A1B0GX49 114 aa8.07□□□□□ -1.12
PTPRF-204ENST00000412568 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
PTPRF-204ENST00000412568 SHISA2Q6UWI4 295 aa8.07□□□□□ -1.12
PTPRF-204ENST00000412568 RPL18AQ02543 176 aaKnown RBP8.07□□□□□ -1.12
PTPRF-204ENST00000412568 PYGO1Q9Y3Y4 419 aa8.07□□□□□ -1.12
PTPRF-204ENST00000412568 LYRM9A8MSI8 78 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 SMIM9A6NGZ8 99 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 hADV29S1A0JD25 119 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 NCR3O14931 201 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
PTPRF-204ENST00000412568 SPATA25Q9BR10 227 aa8.05□□□□□ -1.12
PTPRF-204ENST00000412568 RELNP78509 3460 aa8.05□□□□□ -1.12
PTPRF-204ENST00000412568 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
PTPRF-204ENST00000412568 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
PTPRF-204ENST00000412568 ITPR2Q14571 2701 aa8.05□□□□□ -1.12
PTPRF-204ENST00000412568 IGLV4-69A0A075B6H9 119 aa8.04□□□□□ -1.12
PTPRF-204ENST00000412568 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
PTPRF-204ENST00000412568 KIF25-AS1Q9Y6Z4 181 aa8.04□□□□□ -1.12
PTPRF-204ENST00000412568 MIFP14174 115 aa8.04□□□□□ -1.12
PTPRF-204ENST00000412568 CCDC179H3BU77 68 aa8.04□□□□□ -1.12
PTPRF-204ENST00000412568 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 ZANQ9Y493 2812 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 XAGE1AQ9HD64 81 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 TMEM258P61165 79 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 SPANXCQ9NY87 97 aa8.03□□□□□ -1.12
PTPRF-204ENST00000412568 NBEAL1Q6ZS30 2694 aa8.02□□□□□ -1.12
PTPRF-204ENST00000412568 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.12
PTPRF-204ENST00000412568 C16orf95Q9H693 158 aa8.02□□□□□ -1.13
PTPRF-204ENST00000412568 NANOS2P60321 138 aaKnown RBP8.02□□□□□ -1.13
PTPRF-204ENST00000412568 UBE2D3P61077 147 aa8.02□□□□□ -1.13
PTPRF-204ENST00000412568 UBE2D2P62837 147 aa8.02□□□□□ -1.13
PTPRF-204ENST00000412568 UQCRQO14949 82 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms