RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 DEFB135Q30KP9 77 aa12□□□□□ -0.49
GCFC2-202ENST00000409857 LINC01620Q4KN68 170 aa12□□□□□ -0.49
GCFC2-202ENST00000409857 B5MCH6 92 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 HERV-K104P63124 156 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 OVOL2Q9BRP0 275 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 NACAE9PAV3 2078 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
GCFC2-202ENST00000409857 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
GCFC2-202ENST00000409857 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 PYGO1Q9Y3Y4 419 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
GCFC2-202ENST00000409857 NDUFA12Q9UI09 145 aa11.98□□□□□ -0.49
GCFC2-202ENST00000409857 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
GCFC2-202ENST00000409857 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
GCFC2-202ENST00000409857 C1orf158Q8N1D5 194 aa11.97□□□□□ -0.49
GCFC2-202ENST00000409857 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
GCFC2-202ENST00000409857 DNAH9Q9NYC9 4486 aa11.96□□□□□ -0.49
GCFC2-202ENST00000409857 TMEM262E9PQX1 116 aa11.96□□□□□ -0.49
GCFC2-202ENST00000409857 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.5
GCFC2-202ENST00000409857 DAND5Q8N907 189 aa11.96□□□□□ -0.5
GCFC2-202ENST00000409857 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.5
GCFC2-202ENST00000409857 SMIM9A6NGZ8 99 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 RETNQ9HD89 108 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 M0QXV9 152 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 LINC00467Q9BRT7 94 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 ICOSQ9Y6W8 199 aa11.95□□□□□ -0.5
GCFC2-202ENST00000409857 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
GCFC2-202ENST00000409857 X6R8D5 127 aa11.94□□□□□ -0.5
GCFC2-202ENST00000409857 CLEC2BQ92478 149 aa11.94□□□□□ -0.5
GCFC2-202ENST00000409857 TRAV4A0A0B4J268 109 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 TRBV10-2A0A0K0K1G8 114 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 MIFP14174 115 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 MIAQ16674 131 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
GCFC2-202ENST00000409857 NBEAL2Q6ZNJ1 2754 aa11.92□□□□□ -0.5
GCFC2-202ENST00000409857 LINC01587Q99440 93 aa11.92□□□□□ -0.5
GCFC2-202ENST00000409857 COL7A1Q02388 2944 aa11.92□□□□□ -0.5
GCFC2-202ENST00000409857 H7C423 109 aa11.91□□□□□ -0.5
GCFC2-202ENST00000409857 SMIM20Q8N5G0 67 aa11.91□□□□□ -0.5
GCFC2-202ENST00000409857 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
GCFC2-202ENST00000409857 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
GCFC2-202ENST00000409857 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
GCFC2-202ENST00000409857 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
GCFC2-202ENST00000409857 Q8NAQ8 132 aa11.9□□□□□ -0.5
GCFC2-202ENST00000409857 TENM3Q9P273 2699 aa11.9□□□□□ -0.5
GCFC2-202ENST00000409857 C11orf68Q9H3H3 251 aaKnown RBP11.9□□□□□ -0.5
GCFC2-202ENST00000409857 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
GCFC2-202ENST00000409857 UBE2WQ96B02 151 aa11.89□□□□□ -0.51
GCFC2-202ENST00000409857 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
GCFC2-202ENST00000409857 SNCGO76070 127 aa11.89□□□□□ -0.51
GCFC2-202ENST00000409857 RPL13AP40429 203 aaKnown RBP11.89□□□□□ -0.51
GCFC2-202ENST00000409857 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
GCFC2-202ENST00000409857 COX6A2Q02221 97 aa11.88□□□□□ -0.51
GCFC2-202ENST00000409857 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
GCFC2-202ENST00000409857 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE7O76087 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE12FP0CL80 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE12GP0CL81 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE12IP0CL82 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE4Q13068 117 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE2EQ4V326 116 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 C11orf72Q8NBR9 251 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 C16orf74Q96GX8 76 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 ZNF625Q96I27 306 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-202ENST00000409857 TMEM101Q96IK0 257 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 GAGE2DQ9UEU5 116 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
GCFC2-202ENST00000409857 COX6CP09669 75 aa11.86□□□□□ -0.51
GCFC2-202ENST00000409857 IGHV3-53P01767 116 aa11.85□□□□□ -0.51
GCFC2-202ENST00000409857 NDUFV3P56181 108 aaKnown RBP11.85□□□□□ -0.51
GCFC2-202ENST00000409857 C15orf53Q8NAA6 179 aa11.85□□□□□ -0.51
GCFC2-202ENST00000409857 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
GCFC2-202ENST00000409857 LST1O00453 97 aa11.84□□□□□ -0.51
GCFC2-202ENST00000409857 A0A0J9YWU9 116 aa11.84□□□□□ -0.51
GCFC2-202ENST00000409857 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
GCFC2-202ENST00000409857 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
GCFC2-202ENST00000409857 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
GCFC2-202ENST00000409857 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
GCFC2-202ENST00000409857 Q9H8V8 135 aa11.83□□□□□ -0.52
GCFC2-202ENST00000409857 NDUFA1O15239 70 aa11.82□□□□□ -0.52
GCFC2-202ENST00000409857 H3BT86 120 aa11.82□□□□□ -0.52
GCFC2-202ENST00000409857 IL17DQ8TAD2 202 aa11.82□□□□□ -0.52
GCFC2-202ENST00000409857 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 DEFB4AO15263 64 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 RS1O15537 224 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 TIMM17BO60830 172 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 TIRAPP58753 221 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
GCFC2-202ENST00000409857 PIK3CD-AS1Q5SR53 167 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 DNAJC30Q96LL9 226 aa11.81□□□□□ -0.52
GCFC2-202ENST00000409857 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms