RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 IGHV3-33P01772 117 aa8.58□□□□□ -1.04
PCNX4-204ENST00000406949 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
PCNX4-204ENST00000406949 PPDPFLQ8WWR9 84 aa8.58□□□□□ -1.04
PCNX4-204ENST00000406949 HTN3P15516 51 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 AMELXQ99217 191 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 ADAMTSL4-AS1Q5T5F5 129 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 CLPSL2Q6UWE3 100 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
PCNX4-204ENST00000406949 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 C2orf82Q6UX34 121 aa8.57□□□□□ -1.04
PCNX4-204ENST00000406949 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
PCNX4-204ENST00000406949 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
PCNX4-204ENST00000406949 TEN1Q86WV5 123 aa8.56□□□□□ -1.04
PCNX4-204ENST00000406949 LINC00158P58513 81 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 COX6A2Q02221 97 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 DAZ2Q13117 558 aaKnown RBP8.55□□□□□ -1.04
PCNX4-204ENST00000406949 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
PCNX4-204ENST00000406949 C16orf74Q96GX8 76 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
PCNX4-204ENST00000406949 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 DEFB4AO15263 64 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 NDUFV3P56181 108 aaKnown RBP8.55□□□□□ -1.04
PCNX4-204ENST00000406949 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 MIAQ16674 131 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 ICOSQ9Y6W8 199 aa8.55□□□□□ -1.04
PCNX4-204ENST00000406949 NBPF19A0A087WUL8 3843 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 UBE2D3P61077 147 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 UBE2D2P62837 147 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 TRIAP1O43715 76 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 PFN2P35080 140 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 C5orf38Q86SI9 138 aa8.54□□□□□ -1.04
PCNX4-204ENST00000406949 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
PCNX4-204ENST00000406949 CRLF1O75462 422 aa8.53□□□□□ -1.04
PCNX4-204ENST00000406949 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
PCNX4-204ENST00000406949 SMCPP49901 116 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-204ENST00000406949 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
PCNX4-204ENST00000406949 PIK3CD-AS1Q5SR53 167 aa8.52□□□□□ -1.05
PCNX4-204ENST00000406949 RNASE1P07998 156 aaKnown RBP8.51□□□□□ -1.05
PCNX4-204ENST00000406949 PDZD2O15018 2839 aa8.51□□□□□ -1.05
PCNX4-204ENST00000406949 GYPEP15421 78 aa8.51□□□□□ -1.05
PCNX4-204ENST00000406949 FAM19A5Q7Z5A7 132 aaPredicted RBP8.51□□□□□ -1.05
PCNX4-204ENST00000406949 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
PCNX4-204ENST00000406949 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
PCNX4-204ENST00000406949 XCL1P47992 114 aa8.5□□□□□ -1.05
PCNX4-204ENST00000406949 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
PCNX4-204ENST00000406949 FHL3Q13643 280 aa8.5□□□□□ -1.05
PCNX4-204ENST00000406949 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
PCNX4-204ENST00000406949 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
PCNX4-204ENST00000406949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
PCNX4-204ENST00000406949 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 A8MTW9 85 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 TIRAPP58753 221 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 TEX49A0A1B0GTD5 131 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 NDUFA1O15239 70 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 PAX4O43316 350 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 IGLV1-51P01701 117 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 CRPP02741 224 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
PCNX4-204ENST00000406949 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
PCNX4-204ENST00000406949 J3KT08 172 aa8.48□□□□□ -1.05
PCNX4-204ENST00000406949 CDC42SE2Q9NRR3 84 aa8.48□□□□□ -1.05
PCNX4-204ENST00000406949 SEC61GP60059 68 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 SMIM1B2RUZ4 78 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
PCNX4-204ENST00000406949 HILS1P60008 231 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 SPANXCQ9NY87 97 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
PCNX4-204ENST00000406949 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.05
PCNX4-204ENST00000406949 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.05
PCNX4-204ENST00000406949 FAM104AQ969W3 186 aa8.46□□□□□ -1.05
PCNX4-204ENST00000406949 DNAL4O96015 105 aa8.46□□□□□ -1.06
PCNX4-204ENST00000406949 COX7B2Q8TF08 81 aa8.46□□□□□ -1.06
PCNX4-204ENST00000406949 INAFM1C9JVW0 142 aa8.46□□□□□ -1.06
PCNX4-204ENST00000406949 IGLV4-60A0A075B6I1 120 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 TRBV10-2A0A0K0K1G8 114 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 LITAFQ99732 161 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 TRBV6-4A0A1B0GX49 114 aa8.45□□□□□ -1.06
PCNX4-204ENST00000406949 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
PCNX4-204ENST00000406949 LY6G6DO95868 133 aa8.44□□□□□ -1.06
PCNX4-204ENST00000406949 MALP21145 153 aa8.44□□□□□ -1.06
PCNX4-204ENST00000406949 DAD1P61803 113 aa8.43□□□□□ -1.06
PCNX4-204ENST00000406949 SS18Q15532 418 aa8.43□□□□□ -1.06
PCNX4-204ENST00000406949 FAM222AQ5U5X8 452 aa8.43□□□□□ -1.06
PCNX4-204ENST00000406949 C15orf53Q8NAA6 179 aa8.43□□□□□ -1.06
PCNX4-204ENST00000406949 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
PCNX4-204ENST00000406949 TENM4Q6N022 2769 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms