RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
LSP1-204ENST00000406638 NIPBLQ6KC79 2804 aaeCLIP11.74□□□□□ -0.53
LSP1-204ENST00000406638 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
LSP1-204ENST00000406638 C22orf24Q9Y442 160 aa11.73□□□□□ -0.53
LSP1-204ENST00000406638 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.73□□□□□ -0.53
LSP1-204ENST00000406638 SETXQ7Z333 2677 aaKnown RBP11.72□□□□□ -0.53
LSP1-204ENST00000406638 CIRBPQ14011 172 aaKnown RBP11.72□□□□□ -0.53
LSP1-204ENST00000406638 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 Q9H8V8 135 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 PEMTQ9UBM1 199 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 TIMM17BO60830 172 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 SLURP1P55000 103 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
LSP1-204ENST00000406638 TRAV13-1A0A0B4J241 112 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 LY6G6DO95868 133 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 PRM2P04554 102 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 ATP5G1P05496 136 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 Q9HAA7 133 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.53
LSP1-204ENST00000406638 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.54
LSP1-204ENST00000406638 BEAN1Q3B7T3 259 aa11.71□□□□□ -0.54
LSP1-204ENST00000406638 SOSTDC1Q6X4U4 206 aa11.71□□□□□ -0.54
LSP1-204ENST00000406638 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
LSP1-204ENST00000406638 NDUFA1O15239 70 aa11.7□□□□□ -0.54
LSP1-204ENST00000406638 HOXD3P31249 432 aaPredicted RBP11.7□□□□□ -0.54
LSP1-204ENST00000406638 A0A1B0GX51 115 aa11.7□□□□□ -0.54
LSP1-204ENST00000406638 CXCL5P42830 114 aa11.7□□□□□ -0.54
LSP1-204ENST00000406638 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
LSP1-204ENST00000406638 CRYGAP11844 174 aa11.69□□□□□ -0.54
LSP1-204ENST00000406638 COX6A2Q02221 97 aa11.69□□□□□ -0.54
LSP1-204ENST00000406638 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
LSP1-204ENST00000406638 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
LSP1-204ENST00000406638 Q6ZSN1 163 aa11.68□□□□□ -0.54
LSP1-204ENST00000406638 UBE2E2Q96LR5 201 aa11.67□□□□□ -0.54
LSP1-204ENST00000406638 TRACP01848 142 aa11.67□□□□□ -0.54
LSP1-204ENST00000406638 IGKV3D-7A0A0C4DH55 119 aa11.66□□□□□ -0.54
LSP1-204ENST00000406638 ATOX1O00244 68 aa11.66□□□□□ -0.54
LSP1-204ENST00000406638 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.54
LSP1-204ENST00000406638 INAFM1C9JVW0 142 aa11.65□□□□□ -0.54
LSP1-204ENST00000406638 RNF152Q8N8N0 203 aa11.65□□□□□ -0.54
LSP1-204ENST00000406638 HIST1H4AP62805 103 aaKnown RBP11.65□□□□□ -0.54
LSP1-204ENST00000406638 PIK3CD-AS1Q5SR53 167 aa11.65□□□□□ -0.54
LSP1-204ENST00000406638 TMEM89A2RUT3 159 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 C9orf129Q5T035 196 aaKnown RBP11.64□□□□□ -0.55
LSP1-204ENST00000406638 A0A087WVE0 104 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 RBMY1A1P0DJD3 496 aaKnown RBP11.64□□□□□ -0.55
LSP1-204ENST00000406638 RBMY1CP0DJD4 496 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 INAFM2P0DMQ5 153 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
LSP1-204ENST00000406638 RBMY1FQ15415 496 aaKnown RBP11.64□□□□□ -0.55
LSP1-204ENST00000406638 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
LSP1-204ENST00000406638 MALP21145 153 aa11.63□□□□□ -0.55
LSP1-204ENST00000406638 OR13C6PQ8NH95 151 aa11.63□□□□□ -0.55
LSP1-204ENST00000406638 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
LSP1-204ENST00000406638 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
LSP1-204ENST00000406638 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
LSP1-204ENST00000406638 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
LSP1-204ENST00000406638 DSCR8Q96T75 97 aa11.62□□□□□ -0.55
LSP1-204ENST00000406638 C14orf132Q9NPU4 83 aa11.62□□□□□ -0.55
LSP1-204ENST00000406638 RPL18AQ02543 176 aaKnown RBP11.62□□□□□ -0.55
LSP1-204ENST00000406638 PRIMA1Q86XR5 153 aa11.62□□□□□ -0.55
LSP1-204ENST00000406638 DPH3Q96FX2 82 aa11.62□□□□□ -0.55
LSP1-204ENST00000406638 K7EMT4 169 aa11.61□□□□□ -0.55
LSP1-204ENST00000406638 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
LSP1-204ENST00000406638 DNAL4O96015 105 aa11.61□□□□□ -0.55
LSP1-204ENST00000406638 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
LSP1-204ENST00000406638 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
LSP1-204ENST00000406638 FAM222AQ5U5X8 452 aa11.6□□□□□ -0.55
LSP1-204ENST00000406638 F8P00451 2351 aa11.6□□□□□ -0.55
LSP1-204ENST00000406638 OXTP01178 125 aa11.59□□□□□ -0.55
LSP1-204ENST00000406638 RNASE1P07998 156 aaKnown RBP11.59□□□□□ -0.55
LSP1-204ENST00000406638 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
LSP1-204ENST00000406638 HILS1P60008 231 aa11.59□□□□□ -0.55
LSP1-204ENST00000406638 K7EQG2 157 aa11.58□□□□□ -0.55
LSP1-204ENST00000406638 C4orf3Q8WVX3 66 aa11.58□□□□□ -0.55
LSP1-204ENST00000406638 LINC00846Q9NV44 126 aa11.58□□□□□ -0.55
LSP1-204ENST00000406638 SMIM1B2RUZ4 78 aa11.57□□□□□ -0.56
LSP1-204ENST00000406638 C4orf26Q17RF5 130 aa11.57□□□□□ -0.56
LSP1-204ENST00000406638 TEP1Q99973 2627 aaKnown RBP11.57□□□□□ -0.56
LSP1-204ENST00000406638 SERP2Q8N6R1 65 aa11.57□□□□□ -0.56
LSP1-204ENST00000406638 A0A087WYN8 130 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 COPS9Q8WXC6 57 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 KRTAP10-3P60369 221 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 TMEM258P61165 79 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 LINC01561Q8N1V8 128 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
LSP1-204ENST00000406638 TENM1Q9UKZ4 2725 aa11.55□□□□□ -0.56
LSP1-204ENST00000406638 LINC00337Q8N6G1 96 aa11.55□□□□□ -0.56
LSP1-204ENST00000406638 CYSRT1A8MQ03 144 aa11.54□□□□□ -0.56
LSP1-204ENST00000406638 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
LSP1-204ENST00000406638 NOTCH3Q9UM47 2321 aa11.53□□□□□ -0.56
LSP1-204ENST00000406638 VWFP04275 2813 aa11.53□□□□□ -0.56
LSP1-204ENST00000406638 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
LSP1-204ENST00000406638 CRPP02741 224 aa11.53□□□□□ -0.56
LSP1-204ENST00000406638 RPL28P46779 137 aaKnown RBP11.53□□□□□ -0.56
LSP1-204ENST00000406638 HRCT1Q6UXD1 115 aa11.53□□□□□ -0.56
LSP1-204ENST00000406638 CCL24O00175 119 aa11.52□□□□□ -0.57
LSP1-204ENST00000406638 NCR3O14931 201 aa11.52□□□□□ -0.57
LSP1-204ENST00000406638 Q6JHZ5 121 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms