RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 ANGP03950 147 aaKnown RBP6.11□□□□□ -1.43
VPS53-203ENST00000401468 REG3AQ06141 175 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 MIAQ16674 131 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 ERASQ7Z444 233 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 NFE4Q86UQ8 179 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 LINC00269Q8N2A0 174 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 TMEM101Q96IK0 257 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 AMELXQ99217 191 aa6.11□□□□□ -1.43
VPS53-203ENST00000401468 LRP1BQ9NZR2 4599 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 CCL25O15444 150 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 NUPR1O60356 82 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 SERF1AO75920 110 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 HBDP02042 147 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 RNASEKQ6P5S7 137 aaKnown RBP6.1□□□□□ -1.43
VPS53-203ENST00000401468 Q6ZUT4 128 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 LINC00173Q6ZV60 143 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 FAM19A3Q7Z5A8 133 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 TMEM141Q96I45 108 aa6.1□□□□□ -1.43
VPS53-203ENST00000401468 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
VPS53-203ENST00000401468 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
VPS53-203ENST00000401468 COX11Q9Y6N1 276 aa6.09□□□□□ -1.43
VPS53-203ENST00000401468 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.44
VPS53-203ENST00000401468 LINC00959A0A1B0GUT2 108 aa6.08□□□□□ -1.44
VPS53-203ENST00000401468 DGAT2L7PQ6IED9 249 aa6.08□□□□□ -1.44
VPS53-203ENST00000401468 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
VPS53-203ENST00000401468 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
VPS53-203ENST00000401468 Q9HAA7 133 aa6.08□□□□□ -1.44
VPS53-203ENST00000401468 HSBP1O75506 76 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 CRPP02741 224 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 PAPPA-AS1Q5QFB9 102 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 RMI2Q96E14 147 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
VPS53-203ENST00000401468 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.06□□□□□ -1.44
VPS53-203ENST00000401468 CDK2AP2O75956 126 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 ATP5LO75964 103 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 UBE2D1P51668 147 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 KRTAP10-1P60331 282 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 RNASE13Q5GAN3 156 aaKnown RBP6.06□□□□□ -1.44
VPS53-203ENST00000401468 CLPSL2Q6UWE3 100 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 TEX43Q6ZNM6 134 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 BAALCQ8WXS3 180 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 TM2D2Q9BX73 214 aa6.06□□□□□ -1.44
VPS53-203ENST00000401468 IFITM10A6NMD0 228 aa6.05□□□□□ -1.44
VPS53-203ENST00000401468 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
VPS53-203ENST00000401468 FOXI1Q12951 378 aa6.05□□□□□ -1.44
VPS53-203ENST00000401468 Q6ZN92 141 aa6.05□□□□□ -1.44
VPS53-203ENST00000401468 VCX2Q9H322 139 aa6.05□□□□□ -1.44
VPS53-203ENST00000401468 CST9LQ9H4G1 147 aa6.05□□□□□ -1.44
VPS53-203ENST00000401468 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
VPS53-203ENST00000401468 IGKV2D-24A0A075B6R9 120 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 A0A087WTM6 91 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 TRAV12-1A0A0B4J245 112 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 IGHV3OR16-9A0A0B4J2B5 98 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 NDUFA6P56556 154 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 PMVKQ15126 192 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 SS18Q15532 418 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 LINC00242Q5T6M2 205 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 CHCHD10Q8WYQ3 142 aaPredicted RBP6.04□□□□□ -1.44
VPS53-203ENST00000401468 IFI27L1Q96BM0 104 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 C2orf88Q9BSF0 95 aa6.04□□□□□ -1.44
VPS53-203ENST00000401468 IGLV10-54A0A075B6I4 117 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 LECT2O14960 151 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 LEPROTL1O95214 131 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 RNF151Q2KHN1 245 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 ZC2HC1BQ5TFG8 222 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 LINC01561Q8N1V8 128 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 HSPB8Q9UJY1 196 aa6.03□□□□□ -1.44
VPS53-203ENST00000401468 TRAV13-1A0A0B4J241 112 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 TINCRA0A1B0GVN0 87 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 C5orf52A6NGY3 159 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 IGLC3P0DOY3 106 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 XGP55808 180 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 SEC11AP67812 179 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 WFDC2Q14508 124 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 HIST3H2BBQ8N257 126 aa6.02□□□□□ -1.45
VPS53-203ENST00000401468 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
VPS53-203ENST00000401468 IGLV4-69A0A075B6H9 119 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 A0A087WZ39 114 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 IGKV3OR2-268A0A0C4DH90 116 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 PSCAO43653 123 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 XCL1P47992 114 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 HERVK_113P63121 156 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 COX6A2Q02221 97 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 ODF1Q14990 250 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 LINC01620Q4KN68 170 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 C15orf56Q8N910 161 aa6.01□□□□□ -1.45
VPS53-203ENST00000401468 GVQW2A0A096LPI5 108 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms