RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 DEFB4AO15263 64 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 DEFB1P60022 68 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 Q8N814 137 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 OR5A1Q8NGJ0 315 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 OR10D4PQ8NGN7 298 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
UBE3A-202ENST00000397954 CARHSP1Q9Y2V2 147 aaKnown RBP2.5□□□□□ -2.01
UBE3A-202ENST00000397954 V9GYV3 84 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 IGLV10-54A0A075B6I4 117 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
UBE3A-202ENST00000397954 APOMO95445 188 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 HLA-DQA1P01909 254 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 ESDP10768 282 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 S100PP25815 95 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 ORMDL2Q53FV1 153 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 LYZL1Q6UWQ5 148 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 Q6ZSA8 131 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
UBE3A-202ENST00000397954 A0A0J9YXV3 536 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 EPM2AB3EWF7 344 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 HTN1P15515 57 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 CXCL5P42830 114 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 POLR2KP53803 58 aaKnown RBP2.49□□□□□ -2.01
UBE3A-202ENST00000397954 RPL23P62829 140 aaKnown RBP2.49□□□□□ -2.01
UBE3A-202ENST00000397954 CIRBPQ14011 172 aaKnown RBP2.49□□□□□ -2.01
UBE3A-202ENST00000397954 FAM104BQ5XKR9 115 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 LITAFQ99732 161 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 FAT2Q9NYQ8 4349 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 TRBV20OR9-2A0A075B6H5 130 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 GVQW2A0A096LPI5 108 aaPredicted RBP2.49□□□□□ -2.01
UBE3A-202ENST00000397954 IGHV1-58A0A0C4DH39 117 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 LRCOL1A6NCL2 159 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 H0Y9J4 135 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 NTF3P20783 257 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 RAB5BP61020 215 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
UBE3A-202ENST00000397954 PRR4Q16378 134 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 TEX43Q6ZNM6 134 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 OR10AG1Q8NH19 301 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 GNB1LQ9BYB4 327 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 COL7A1Q02388 2944 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 DNAH11Q96DT5 4516 aa2.49□□□□□ -2.01
UBE3A-202ENST00000397954 PSCAO43653 123 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 ALKAL2Q6UX46 152 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 TMEM141Q96I45 108 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 DERL1Q9BUN8 251 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 A0A0J9YY99 117 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 C7orf77A4D0Y5 90 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 HIGD1CA8MV81 97 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 TLX1NBP0CAT3 122 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 SS18Q15532 418 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 TIMM17AQ99595 171 aa2.48□□□□□ -2.01
UBE3A-202ENST00000397954 IGLV7-46A0A075B6I9 117 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 A0A0J9YXY3 114 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 COMMD7Q86VX2 200 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
UBE3A-202ENST00000397954 IGHV3-64A0A075B6Q5 118 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 FAM19A5Q7Z5A7 132 aaPredicted RBP2.47□□□□□ -2.01
UBE3A-202ENST00000397954 WFDC10BQ8IUB3 73 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 Q8N8P6 123 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 NUP35Q8NFH5 326 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 C2orf88Q9BSF0 95 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 IGLV8-61A0A075B6I0 122 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 TMEM218A2RU14 115 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 SDHAF1A6NFY7 115 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 C1orf196B1AJZ1 125 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 SFTA3P0C7M3 94 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 SAMD10Q9BYL1 202 aa2.47□□□□□ -2.01
UBE3A-202ENST00000397954 TRBV30A0A0K0K1B3 111 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 GRIFINA4D1Z8 144 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 MGPP08493 103 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 FCER1GP30273 86 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 RBX1P62877 108 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 PMVKQ15126 192 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 C6orf99Q4VX62 202 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 FAM74A4Q5TZK3 123 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 AMMECR1LQ6DCA0 310 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 SVBPQ8N300 66 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 C9orf163Q8N9P6 203 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 LINC00526Q96FQ7 95 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 DNAH8Q96JB1 4490 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 PKHD1L1Q86WI1 4243 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 LINC00587B1AMM8 73 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 NDUFS5O43920 106 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 CFC1BP0CG36 223 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 CFC1P0CG37 223 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 IFI27P40305 119 aaPredicted RBP2.46□□□□□ -2.02
UBE3A-202ENST00000397954 ADIRFQ15847 76 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 Q8N377 158 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
UBE3A-202ENST00000397954 SPANXB1Q9NS25 103 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms