RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CRYGDP07320 174 aa7.96□□□□□ -1.14
CCDC40-204ENST00000397545 XGP55808 180 aa7.96□□□□□ -1.14
CCDC40-204ENST00000397545 DEFB114Q30KQ6 69 aa7.96□□□□□ -1.14
CCDC40-204ENST00000397545 SDIM1Q6ZPB5 146 aa7.96□□□□□ -1.14
CCDC40-204ENST00000397545 PLA2G2AP14555 144 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 CFAP126Q5VTH2 177 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 LINC00643Q86TS7 51 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 ITPR3Q14573 2671 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 TMEM89A2RUT3 159 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 TSHBP01222 138 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 RPL18AQ02543 176 aaKnown RBP7.95□□□□□ -1.14
CCDC40-204ENST00000397545 TRAV23DV6A0A075B6W5 121 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 SPANXDQ9BXN6 97 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 UBE2BP63146 152 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 C18orf65Q6ZTR6 163 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 C4orf3Q8WVX3 66 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 CNFNQ9BYD5 112 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 SPANXCQ9NY87 97 aa7.95□□□□□ -1.14
CCDC40-204ENST00000397545 PSMB8P28062 276 aa7.94□□□□□ -1.14
CCDC40-204ENST00000397545 HRNRQ86YZ3 2850 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-204ENST00000397545 F8W735 103 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-204ENST00000397545 LINC00269Q8N2A0 174 aa7.94□□□□□ -1.14
CCDC40-204ENST00000397545 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
CCDC40-204ENST00000397545 UFSP1Q6NVU6 142 aa7.94□□□□□ -1.14
CCDC40-204ENST00000397545 SMR3AQ99954 134 aa7.94□□□□□ -1.14
CCDC40-204ENST00000397545 DNAJC9-AS1A6NH13 148 aa7.93□□□□□ -1.14
CCDC40-204ENST00000397545 KLLNB2CW77 178 aa7.93□□□□□ -1.14
CCDC40-204ENST00000397545 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
CCDC40-204ENST00000397545 ZMAT4Q9H898 229 aa7.93□□□□□ -1.14
CCDC40-204ENST00000397545 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 ODF3Q96PU9 254 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 TRBV6-5A0A0K0K1A5 114 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 HIGD2BQ4VC39 106 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 JMJD7-PLA2G4BH0Y9G9 81 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 AVPP01185 164 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 Q6ZSV7 163 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 POM121L12Q8N7R1 296 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 NREPQ16612 68 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
CCDC40-204ENST00000397545 IGIPA6NJ69 53 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 NDUFA7O95182 113 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 C9orf66Q5T8R8 295 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 DCANP1Q8TF63 244 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 ZNF580Q9UK33 172 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 FLNAP21333 2647 aaKnown RBP7.91□□□□□ -1.14
CCDC40-204ENST00000397545 LOC100131303A0A0U1RQF7 123 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 INAFM1C9JVW0 142 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 NDUFA1O15239 70 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 FAM222AQ5U5X8 452 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 XAGE1AQ9HD64 81 aa7.91□□□□□ -1.14
CCDC40-204ENST00000397545 CRIP2P52943 208 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-204ENST00000397545 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
CCDC40-204ENST00000397545 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
CCDC40-204ENST00000397545 FUSP35637 526 aaKnown RBP eCLIP7.9□□□□□ -1.15
CCDC40-204ENST00000397545 Q6YL49 198 aa7.9□□□□□ -1.15
CCDC40-204ENST00000397545 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 TMEM256-PLSCR3K7ERE1 68 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 IGHV4-31P0DP07 118 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
CCDC40-204ENST00000397545 PYGO1Q9Y3Y4 419 aa7.88□□□□□ -1.15
CCDC40-204ENST00000397545 TIRAPP58753 221 aa7.88□□□□□ -1.15
CCDC40-204ENST00000397545 REG3AQ06141 175 aa7.88□□□□□ -1.15
CCDC40-204ENST00000397545 C9orf85Q96MD7 179 aa7.88□□□□□ -1.15
CCDC40-204ENST00000397545 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
CCDC40-204ENST00000397545 J3KT08 172 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 CHCHD10Q8WYQ3 142 aaPredicted RBP7.87□□□□□ -1.15
CCDC40-204ENST00000397545 CLUHP3Q96NS8 147 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 C6orf99Q4VX62 202 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
CCDC40-204ENST00000397545 TRBV6-8A0A0A6YYG3 113 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 LST1O00453 97 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 CXCL5P42830 114 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 UBE2D1P51668 147 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 H7C423 109 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 FLNCQ14315 2725 aa7.86□□□□□ -1.15
CCDC40-204ENST00000397545 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
CCDC40-204ENST00000397545 RMI2Q96E14 147 aa7.85□□□□□ -1.15
CCDC40-204ENST00000397545 ENHOQ6UWT2 76 aa7.85□□□□□ -1.15
CCDC40-204ENST00000397545 UPK3BQ9BT76 320 aa7.85□□□□□ -1.15
CCDC40-204ENST00000397545 ZNF702PQ9H963 129 aa7.85□□□□□ -1.15
CCDC40-204ENST00000397545 TMEM258P61165 79 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 ITPR1Q14643 2758 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 IGLV2-18A0A075B6J9 118 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 IBA57-AS1B1ANH7 110 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 NDUFS5O43920 106 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 UQCRQO14949 82 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
CCDC40-204ENST00000397545 BAHCC1Q9P281 2608 aa7.84□□□□□ -1.16
CCDC40-204ENST00000397545 MRPS36P82909 103 aaKnown RBP7.83□□□□□ -1.16
CCDC40-204ENST00000397545 COX7BP24311 80 aa7.83□□□□□ -1.16
CCDC40-204ENST00000397545 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
CCDC40-204ENST00000397545 ADAMTSL4-AS1Q5T5F5 129 aa7.83□□□□□ -1.16
CCDC40-204ENST00000397545 GCN1Q92616 2671 aaKnown RBP7.83□□□□□ -1.16
CCDC40-204ENST00000397545 CCL18P55774 89 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms