RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 LINC00526Q96FQ7 95 aa11.47□□□□□ -0.57
PDE1C-202ENST00000396182 ZNF469Q96JG9 3925 aaPredicted RBP11.47□□□□□ -0.57
PDE1C-202ENST00000396182 PTPN13Q12923 2485 aa11.47□□□□□ -0.57
PDE1C-202ENST00000396182 INSP01308 110 aa11.46□□□□□ -0.58
PDE1C-202ENST00000396182 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
PDE1C-202ENST00000396182 TRAV13-1A0A0B4J241 112 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 F5H768 121 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 GAGE2AQ6NT46 116 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 C4orf3Q8WVX3 66 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 CHD6Q8TD26 2715 aa11.45□□□□□ -0.58
PDE1C-202ENST00000396182 CR1P17927 2039 aa11.44□□□□□ -0.58
PDE1C-202ENST00000396182 Q9HAA7 133 aa11.44□□□□□ -0.58
PDE1C-202ENST00000396182 KRTAP10-9P60411 292 aa11.44□□□□□ -0.58
PDE1C-202ENST00000396182 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 USP24Q9UPU5 2620 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 ZNF462Q96JM2 2506 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 MALP21145 153 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
PDE1C-202ENST00000396182 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
PDE1C-202ENST00000396182 NAV2Q8IVL1 2488 aa11.42□□□□□ -0.58
PDE1C-202ENST00000396182 COX7CP15954 63 aa11.41□□□□□ -0.58
PDE1C-202ENST00000396182 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
PDE1C-202ENST00000396182 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
PDE1C-202ENST00000396182 KLK5Q9Y337 293 aaPredicted RBP11.41□□□□□ -0.58
PDE1C-202ENST00000396182 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
PDE1C-202ENST00000396182 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
PDE1C-202ENST00000396182 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
PDE1C-202ENST00000396182 C2orf48Q96LS8 159 aa11.41□□□□□ -0.58
PDE1C-202ENST00000396182 WNK1Q9H4A3 2382 aa11.41□□□□□ -0.58
PDE1C-202ENST00000396182 PRB1P04280 392 aa11.4□□□□□ -0.58
PDE1C-202ENST00000396182 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
PDE1C-202ENST00000396182 EPG5Q9HCE0 2579 aa11.4□□□□□ -0.58
PDE1C-202ENST00000396182 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
PDE1C-202ENST00000396182 CRPP02741 224 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 LINC00337Q8N6G1 96 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 Q96MF0 132 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 NOTCH3Q9UM47 2321 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
PDE1C-202ENST00000396182 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
PDE1C-202ENST00000396182 STHQ8IWL8 128 aa11.38□□□□□ -0.59
PDE1C-202ENST00000396182 Q6ZTI0 123 aa11.38□□□□□ -0.59
PDE1C-202ENST00000396182 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
PDE1C-202ENST00000396182 IGKV2-28A0A075B6P5 120 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 IGKV2D-28P01615 120 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
PDE1C-202ENST00000396182 NF1P21359 2839 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 A0A087WYN8 130 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 ATOX1O00244 68 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 DNAL4O96015 105 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 CRYGAP11844 174 aa11.37□□□□□ -0.59
PDE1C-202ENST00000396182 RPL36AP83881 106 aaKnown RBP11.36□□□□□ -0.59
PDE1C-202ENST00000396182 RPL36ALQ969Q0 106 aaKnown RBP11.36□□□□□ -0.59
PDE1C-202ENST00000396182 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
PDE1C-202ENST00000396182 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
PDE1C-202ENST00000396182 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
PDE1C-202ENST00000396182 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
PDE1C-202ENST00000396182 NBPF19A0A087WUL8 3843 aa11.35□□□□□ -0.59
PDE1C-202ENST00000396182 K7EQD1 137 aa11.35□□□□□ -0.59
PDE1C-202ENST00000396182 UBR5O95071 2799 aaPredicted RBP11.35□□□□□ -0.59
PDE1C-202ENST00000396182 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
PDE1C-202ENST00000396182 C14orf132Q9NPU4 83 aa11.35□□□□□ -0.59
PDE1C-202ENST00000396182 SMIM11BQ8TCY0 68 aa11.34□□□□□ -0.59
PDE1C-202ENST00000396182 TRBV10-1A0A0K0K1A3 114 aa11.34□□□□□ -0.59
PDE1C-202ENST00000396182 A0A1B0GX51 115 aa11.34□□□□□ -0.59
PDE1C-202ENST00000396182 J3KT08 172 aa11.34□□□□□ -0.59
PDE1C-202ENST00000396182 DEFB113Q30KQ7 82 aa11.34□□□□□ -0.59
PDE1C-202ENST00000396182 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
PDE1C-202ENST00000396182 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
PDE1C-202ENST00000396182 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
PDE1C-202ENST00000396182 NOP10Q9NPE3 64 aaKnown RBP11.33□□□□□ -0.6
PDE1C-202ENST00000396182 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
PDE1C-202ENST00000396182 CYSTM1Q9H1C7 97 aa11.32□□□□□ -0.6
PDE1C-202ENST00000396182 Q6JHZ5 121 aa11.31□□□□□ -0.6
PDE1C-202ENST00000396182 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
PDE1C-202ENST00000396182 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
PDE1C-202ENST00000396182 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
PDE1C-202ENST00000396182 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
PDE1C-202ENST00000396182 CCL24O00175 119 aa11.3□□□□□ -0.6
PDE1C-202ENST00000396182 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
PDE1C-202ENST00000396182 UBE2L6O14933 153 aa11.29□□□□□ -0.6
PDE1C-202ENST00000396182 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
PDE1C-202ENST00000396182 TOMM7Q9P0U1 55 aa11.29□□□□□ -0.6
PDE1C-202ENST00000396182 LOC100131303A0A0U1RQF7 123 aa11.29□□□□□ -0.6
PDE1C-202ENST00000396182 H0YGX0 51 aa11.29□□□□□ -0.6
PDE1C-202ENST00000396182 GIG44P09565 113 aaPredicted RBP11.29□□□□□ -0.6
PDE1C-202ENST00000396182 CCL18P55774 89 aa11.29□□□□□ -0.6
PDE1C-202ENST00000396182 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
PDE1C-202ENST00000396182 LINC00158P58513 81 aa11.28□□□□□ -0.6
PDE1C-202ENST00000396182 LECT2O14960 151 aa11.28□□□□□ -0.6
PDE1C-202ENST00000396182 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
PDE1C-202ENST00000396182 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
PDE1C-202ENST00000396182 WFDC10AQ9H1F0 79 aa11.28□□□□□ -0.6
PDE1C-202ENST00000396182 A0A087WVE0 104 aa11.27□□□□□ -0.6
PDE1C-202ENST00000396182 APCP25054 2843 aa11.27□□□□□ -0.61
PDE1C-202ENST00000396182 DNAJC9-AS1A6NH13 148 aa11.27□□□□□ -0.61
PDE1C-202ENST00000396182 PLA2G2AP14555 144 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms