RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TEX49A0A1B0GTD5 131 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 NUPR2A6NF83 97 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 SAA2P0DJI9 122 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 EFNA4P52798 201 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 CSAG1Q6PB30 78 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 PPP1R1CQ8WVI7 109 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 CYSTM1Q9H1C7 97 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 CDC42SE2Q9NRR3 84 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 LENEPQ9Y5L5 61 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 CNOT1A5YKK6 2376 aaKnown RBP2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 FBN2P35556 2912 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 GREB1Q4ZG55 1949 aa2.23□□□□□ -2.05
HMGB1P10-201ENST00000395823 MGAMO43451 1857 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 SCN3AQ9NY46 2000 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 ARFGEF1Q9Y6D6 1849 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 A0A1B0GWA3 101 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 IGHV3-30P01768 117 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 IGHV3-30-5P0DP03 117 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 DEFB121Q5J5C9 76 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 Q5VV11 94 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 FAM223AQ8IWN6 122 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 AMELXQ99217 191 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 CEP250Q9BV73 2442 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 DOCK1Q14185 1865 aa2.22□□□□□ -2.05
HMGB1P10-201ENST00000395823 TEX15Q9BXT5 2789 aa2.21□□□□□ -2.05
HMGB1P10-201ENST00000395823 PIEZO2Q9H5I5 2752 aa2.21□□□□□ -2.05
HMGB1P10-201ENST00000395823 PIK3C2BO00750 1634 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 TRGV4A0A0C4DH28 118 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 A0A0G2JQZ4 141 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 MYMXA0A1B0GTQ4 84 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 CEBPZOSA8MTT3 80 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 J3QRE1 110 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 TFF1P04155 84 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 SSBP1Q04837 148 aaKnown RBP2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 SPTAN1Q13813 2472 aaKnown RBP2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 PLGLAQ15195 96 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 KNDC1Q76NI1 1749 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 PATE1Q8WXA2 126 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 BPESC1Q9GZL8 116 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 TMEM14BQ9NUH8 114 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 MYO15AQ9UKN7 3530 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 COL4A6Q14031 1691 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 NAV3Q8IVL0 2385 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 ARHGAP32A7KAX9 2087 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 MYH8P13535 1937 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 RELNP78509 3460 aa2.21□□□□□ -2.06
HMGB1P10-201ENST00000395823 MUC4Q99102 2169 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 CCDC88CQ9P219 2028 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 SMG1Q96Q15 3661 aaKnown RBP2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 CELSR3Q9NYQ7 3312 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 TRBV6-7A0A0A0MS04 114 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 TRBV6-8A0A0A6YYG3 113 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 LOC101927531A0A1B0GV80 90 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 COX8AP10176 69 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 FAM74A4Q5TZK3 123 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 SFTA2Q6UW10 78 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 KRTAP13-1Q8IUC0 172 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 MALRD1Q5VYJ5 2156 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 TRPM7Q96QT4 1865 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
HMGB1P10-201ENST00000395823 POLQO75417 2590 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 DMXL1Q9Y485 3027 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 IGLV3-32A0A0A0MS00 114 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 IQCF6A8MYZ5 107 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 F8WEM9 126 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 FXYD1O00168 92 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 HMGN4O00479 90 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 PPP1R17O96001 155 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 DNAL4O96015 105 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 FREM3P0C091 2139 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 NDUFA4L2Q9NRX3 87 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 R4GMQ9 66 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 SLX4Q8IY92 1834 aa2.19□□□□□ -2.06
HMGB1P10-201ENST00000395823 FAM186AA6NE01 2351 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 CTTNBP2Q8WZ74 1663 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 KIAA2026Q5HYC2 2103 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 LTN1O94822 1766 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 MYO16Q9Y6X6 1858 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 TRBV6-4A0A1B0GX49 114 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 PDE6GP18545 87 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 SPAG11BQ08648 103 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 ATP5EP2Q5VTU8 51 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 SPAG11AQ6PDA7 123 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 TTTY12Q9BZ98 90 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 ARL2-SNX15V9GYD0 113 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 FRYQ5TBA9 3013 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 SETD2Q9BYW2 2564 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 DIDO1Q9BTC0 2240 aaKnown RBP2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 LAMB1P07942 1786 aa2.18□□□□□ -2.06
HMGB1P10-201ENST00000395823 RIF1Q5UIP0 2472 aaKnown RBP2.17□□□□□ -2.06
HMGB1P10-201ENST00000395823 SNRNP200O75643 2136 aaKnown RBP2.17□□□□□ -2.06
HMGB1P10-201ENST00000395823 IGKV3-7A0A075B6H7 116 aa2.17□□□□□ -2.06
HMGB1P10-201ENST00000395823 JMJD7-PLA2G4BH0Y9G9 81 aa2.17□□□□□ -2.06
HMGB1P10-201ENST00000395823 LEPROTL1O95214 131 aa2.17□□□□□ -2.06
HMGB1P10-201ENST00000395823 GCHFRP30047 84 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms