RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 INAFM1C9JVW0 142 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 A0A0U1RQV1 116 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 SPTSSBQ8NFR3 76 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 SNURFQ9Y675 71 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 TANC2Q9HCD6 1990 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 TRAV7A0A075B6U4 112 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 IGLV1-40P01703 118 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 MIFP14174 115 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 SVIPQ8NHG7 77 aa12.59□□□□□ -0.39
SIN3A-203ENST00000394949 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
SIN3A-203ENST00000394949 SERP1Q9Y6X1 66 aa12.58□□□□□ -0.4
SIN3A-203ENST00000394949 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
SIN3A-203ENST00000394949 LINC00242Q5T6M2 205 aa12.58□□□□□ -0.4
SIN3A-203ENST00000394949 CHD8Q9HCK8 2581 aa12.57□□□□□ -0.4
SIN3A-203ENST00000394949 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
SIN3A-203ENST00000394949 USP9YO00507 2555 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-203ENST00000394949 Q8IZM0 81 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 DEFB131BA0A096LNP1 70 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-203ENST00000394949 HILS1P60008 231 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 AMELXQ99217 191 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 B9D2Q9BPU9 175 aa12.56□□□□□ -0.4
SIN3A-203ENST00000394949 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
SIN3A-203ENST00000394949 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
SIN3A-203ENST00000394949 SMIM1B2RUZ4 78 aa12.54□□□□□ -0.4
SIN3A-203ENST00000394949 CEP295Q9C0D2 2601 aa12.54□□□□□ -0.4
SIN3A-203ENST00000394949 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
SIN3A-203ENST00000394949 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
SIN3A-203ENST00000394949 FN1P02751 2386 aaKnown RBP12.54□□□□□ -0.4
SIN3A-203ENST00000394949 M0R378 163 aa12.54□□□□□ -0.4
SIN3A-203ENST00000394949 NTM-AS1Q6ZSK4 140 aa12.53□□□□□ -0.4
SIN3A-203ENST00000394949 SETD2Q9BYW2 2564 aaPredicted RBP12.53□□□□□ -0.4
SIN3A-203ENST00000394949 LINC01006Q8NI28 216 aa12.53□□□□□ -0.4
SIN3A-203ENST00000394949 TRBV7-7A0A0K0K1E9 115 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 DHRS4-AS1Q9P1J3 65 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 HRCT1Q6UXD1 115 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 HIGD2AQ9BW72 106 aa12.51□□□□□ -0.41
SIN3A-203ENST00000394949 IGKV4-1P06312 121 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 ADAMTSL4-AS1Q5T5F5 129 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 C1orf195Q5TG92 126 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
SIN3A-203ENST00000394949 LINC00482Q8N8I6 264 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 ARHGAP32A7KAX9 2087 aa12.5□□□□□ -0.41
SIN3A-203ENST00000394949 C3orf84H3BNL1 204 aa12.49□□□□□ -0.41
SIN3A-203ENST00000394949 SYCNQ0VAF6 134 aa12.49□□□□□ -0.41
SIN3A-203ENST00000394949 CPAMD8Q8IZJ3 1885 aa12.49□□□□□ -0.41
SIN3A-203ENST00000394949 ZNF73O43830 326 aaPredicted RBP12.48□□□□□ -0.41
SIN3A-203ENST00000394949 BRI3O95415 125 aa12.48□□□□□ -0.41
SIN3A-203ENST00000394949 LY6G6DO95868 133 aa12.48□□□□□ -0.41
SIN3A-203ENST00000394949 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
SIN3A-203ENST00000394949 Q8N814 137 aa12.48□□□□□ -0.41
SIN3A-203ENST00000394949 ANKRD11Q6UB99 2663 aaPredicted RBP12.48□□□□□ -0.41
SIN3A-203ENST00000394949 SEC61GP60059 68 aa12.47□□□□□ -0.41
SIN3A-203ENST00000394949 A0A087WVE0 104 aa12.46□□□□□ -0.41
SIN3A-203ENST00000394949 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.41
SIN3A-203ENST00000394949 LRP4O75096 1905 aa12.46□□□□□ -0.41
SIN3A-203ENST00000394949 KIR2DL5BQ8NHK3 375 aa12.45□□□□□ -0.42
SIN3A-203ENST00000394949 A0A087WZ39 114 aa12.45□□□□□ -0.42
SIN3A-203ENST00000394949 FAM19A1Q7Z5A9 133 aa12.45□□□□□ -0.42
SIN3A-203ENST00000394949 TRAV10A0A0B4J240 114 aa12.44□□□□□ -0.42
SIN3A-203ENST00000394949 LELP1Q5T871 98 aa12.44□□□□□ -0.42
SIN3A-203ENST00000394949 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
SIN3A-203ENST00000394949 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
SIN3A-203ENST00000394949 LRRK2Q5S007 2527 aa12.44□□□□□ -0.42
SIN3A-203ENST00000394949 WFDC10BQ8IUB3 73 aa12.43□□□□□ -0.42
SIN3A-203ENST00000394949 CEP192Q8TEP8 1941 aa12.43□□□□□ -0.42
SIN3A-203ENST00000394949 A0A087WYN8 130 aa12.43□□□□□ -0.42
SIN3A-203ENST00000394949 COL5A1P20908 1838 aaPredicted RBP12.43□□□□□ -0.42
SIN3A-203ENST00000394949 PTPRSQ13332 1948 aa12.42□□□□□ -0.42
SIN3A-203ENST00000394949 ZNF462Q96JM2 2506 aa12.42□□□□□ -0.42
SIN3A-203ENST00000394949 PRO0461Q9UI25 63 aa12.42□□□□□ -0.42
SIN3A-203ENST00000394949 PKD1L2Q7Z442 2459 aa12.42□□□□□ -0.42
SIN3A-203ENST00000394949 COX6A2Q02221 97 aa12.42□□□□□ -0.42
SIN3A-203ENST00000394949 CDSNQ15517 529 aa12.41□□□□□ -0.42
SIN3A-203ENST00000394949 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
SIN3A-203ENST00000394949 PRM2P04554 102 aa12.4□□□□□ -0.43
SIN3A-203ENST00000394949 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
SIN3A-203ENST00000394949 PRR15LQ9BU68 103 aa12.39□□□□□ -0.43
SIN3A-203ENST00000394949 A6NED7 52 aa12.39□□□□□ -0.43
SIN3A-203ENST00000394949 LOC107984640A0A0U1RRK4 108 aa12.38□□□□□ -0.43
SIN3A-203ENST00000394949 AVPP01185 164 aa12.38□□□□□ -0.43
SIN3A-203ENST00000394949 BEAN1Q3B7T3 259 aa12.38□□□□□ -0.43
SIN3A-203ENST00000394949 TRBV10-3A0A0K0K1G6 114 aa12.37□□□□□ -0.43
SIN3A-203ENST00000394949 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
SIN3A-203ENST00000394949 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
SIN3A-203ENST00000394949 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
SIN3A-203ENST00000394949 WFDC13Q8IUB5 93 aa12.37□□□□□ -0.43
SIN3A-203ENST00000394949 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
SIN3A-203ENST00000394949 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
SIN3A-203ENST00000394949 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
SIN3A-203ENST00000394949 PRYO14603 147 aa12.36□□□□□ -0.43
SIN3A-203ENST00000394949 Q8N3U1 123 aa12.36□□□□□ -0.43
SIN3A-203ENST00000394949 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
SIN3A-203ENST00000394949 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
SIN3A-203ENST00000394949 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
SIN3A-203ENST00000394949 CRYGAP11844 174 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms