RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 Q8N3U1 123 aa11.98□□□□□ -0.49
MBD4-202ENST00000393278 HSD52Q0P140 79 aa11.97□□□□□ -0.49
MBD4-202ENST00000393278 BVES-AS1Q5T3Y7 98 aa11.97□□□□□ -0.49
MBD4-202ENST00000393278 C15orf53Q8NAA6 179 aa11.97□□□□□ -0.49
MBD4-202ENST00000393278 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.5
MBD4-202ENST00000393278 ESRGQ1W209 222 aa11.96□□□□□ -0.5
MBD4-202ENST00000393278 LINC00269Q8N2A0 174 aa11.96□□□□□ -0.5
MBD4-202ENST00000393278 IGLV5-39A0A0G2JS06 123 aa11.95□□□□□ -0.5
MBD4-202ENST00000393278 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
MBD4-202ENST00000393278 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
MBD4-202ENST00000393278 IGHV3OR16-9A0A0B4J2B5 98 aa11.94□□□□□ -0.5
MBD4-202ENST00000393278 CCL25O15444 150 aa11.94□□□□□ -0.5
MBD4-202ENST00000393278 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
MBD4-202ENST00000393278 SS18Q15532 418 aa11.94□□□□□ -0.5
MBD4-202ENST00000393278 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
MBD4-202ENST00000393278 REG3AQ06141 175 aa11.93□□□□□ -0.5
MBD4-202ENST00000393278 WFDC10BQ8IUB3 73 aa11.93□□□□□ -0.5
MBD4-202ENST00000393278 COL7A1Q02388 2944 aa11.92□□□□□ -0.5
MBD4-202ENST00000393278 ZFAND6Q6FIF0 208 aa11.92□□□□□ -0.5
MBD4-202ENST00000393278 TAL2Q16559 108 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 A0A087WZ39 114 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 XCL1P47992 114 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 COL5A1-AS1Q5SY13 56 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 C10orf126Q8N4M7 172 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
MBD4-202ENST00000393278 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
MBD4-202ENST00000393278 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
MBD4-202ENST00000393278 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
MBD4-202ENST00000393278 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
MBD4-202ENST00000393278 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
MBD4-202ENST00000393278 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
MBD4-202ENST00000393278 IGLL5B9A064 214 aa11.88□□□□□ -0.51
MBD4-202ENST00000393278 C5orf38Q86SI9 138 aa11.88□□□□□ -0.51
MBD4-202ENST00000393278 CEND1Q8N111 149 aa11.88□□□□□ -0.51
MBD4-202ENST00000393278 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
MBD4-202ENST00000393278 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 NDUFA1O15239 70 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 GCSHP23434 173 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 SPANXB1Q9NS25 103 aaPredicted RBP11.87□□□□□ -0.51
MBD4-202ENST00000393278 ENHOQ6UWT2 76 aa11.87□□□□□ -0.51
MBD4-202ENST00000393278 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
MBD4-202ENST00000393278 LINC01561Q8N1V8 128 aa11.86□□□□□ -0.51
MBD4-202ENST00000393278 IGLV10-54A0A075B6I4 117 aa11.85□□□□□ -0.51
MBD4-202ENST00000393278 FXYD2P54710 66 aa11.85□□□□□ -0.51
MBD4-202ENST00000393278 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
MBD4-202ENST00000393278 COX7B2Q8TF08 81 aa11.84□□□□□ -0.51
MBD4-202ENST00000393278 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
MBD4-202ENST00000393278 CRPP02741 224 aa11.84□□□□□ -0.51
MBD4-202ENST00000393278 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
MBD4-202ENST00000393278 Q9H8V8 135 aa11.84□□□□□ -0.51
MBD4-202ENST00000393278 STAB2Q8WWQ8 2551 aa11.83□□□□□ -0.51
MBD4-202ENST00000393278 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
MBD4-202ENST00000393278 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 K7EP13 123 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 COX7A2LO14548 114 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 CCL18P55774 89 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 FOXI1Q12951 378 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 UBE2WQ96B02 151 aa11.83□□□□□ -0.52
MBD4-202ENST00000393278 TRAV8-4A0A0B4J246 113 aa11.82□□□□□ -0.52
MBD4-202ENST00000393278 A6NDN8 102 aa11.82□□□□□ -0.52
MBD4-202ENST00000393278 DNAH10OSP0CZ25 163 aa11.82□□□□□ -0.52
MBD4-202ENST00000393278 LITAFQ99732 161 aa11.82□□□□□ -0.52
MBD4-202ENST00000393278 MEGF8Q7Z7M0 2845 aa11.81□□□□□ -0.52
MBD4-202ENST00000393278 PTTG1IPP53801 180 aa11.81□□□□□ -0.52
MBD4-202ENST00000393278 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
MBD4-202ENST00000393278 TIMM17BO60830 172 aa11.81□□□□□ -0.52
MBD4-202ENST00000393278 MIAQ16674 131 aa11.81□□□□□ -0.52
MBD4-202ENST00000393278 A0A1B0GV90 55 aa11.8□□□□□ -0.52
MBD4-202ENST00000393278 GAGE12HA6NDE8 117 aa11.8□□□□□ -0.52
MBD4-202ENST00000393278 HERV-K104P63124 156 aa11.8□□□□□ -0.52
MBD4-202ENST00000393278 UPK3BQ9BT76 320 aa11.79□□□□□ -0.52
MBD4-202ENST00000393278 TAX1BP3O14907 124 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 Q8IZM0 81 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 SPANXDQ9BXN6 97 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 SPANXCQ9NY87 97 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 DYNC2H1Q8NCM8 4307 aaKnown RBP11.78□□□□□ -0.52
MBD4-202ENST00000393278 MALP21145 153 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 ADAMTSL4-AS1Q5T5F5 129 aa11.78□□□□□ -0.52
MBD4-202ENST00000393278 Q6ZVH6 145 aa11.77□□□□□ -0.53
MBD4-202ENST00000393278 NHP2Q9NX24 153 aaKnown RBP11.77□□□□□ -0.53
MBD4-202ENST00000393278 APLNQ9ULZ1 77 aa11.77□□□□□ -0.53
MBD4-202ENST00000393278 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
MBD4-202ENST00000393278 A6NJY4 79 aa11.76□□□□□ -0.53
MBD4-202ENST00000393278 PRSS2P07478 247 aa11.76□□□□□ -0.53
MBD4-202ENST00000393278 CIRBPQ14011 172 aaKnown RBP11.76□□□□□ -0.53
MBD4-202ENST00000393278 SFTA2Q6UW10 78 aa11.76□□□□□ -0.53
MBD4-202ENST00000393278 NUPR2A6NF83 97 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 C6orf226Q5I0X4 101 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 SMIM13P0DJ93 91 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 KIAA0087Q14695 138 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 KRTAP26-1Q6PEX3 210 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
MBD4-202ENST00000393278 A0A1B0GWB2 263 aa11.74□□□□□ -0.53
MBD4-202ENST00000393278 APOMO95445 188 aa11.74□□□□□ -0.53
MBD4-202ENST00000393278 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
MBD4-202ENST00000393278 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
MBD4-202ENST00000393278 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms