RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 LINC00526Q96FQ7 95 aa13.92□□□□□ -0.18
PPFIA1-202ENST00000389547 FAM240AA0A1B0GVK7 77 aa13.91□□□□□ -0.18
PPFIA1-202ENST00000389547 ZFAND2AQ8N6M9 145 aa13.91□□□□□ -0.18
PPFIA1-202ENST00000389547 UBL5Q9BZL1 73 aa13.91□□□□□ -0.18
PPFIA1-202ENST00000389547 MRAPQ8TCY5 172 aa13.91□□□□□ -0.18
PPFIA1-202ENST00000389547 IGLV4-3A0A075B6K6 122 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 TRAV13-2A0A0B4J235 113 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 LAMTOR3Q9UHA4 124 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 DCHS2Q6V1P9 2916 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 C20orf197Q8N268 126 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 MAST4O15021 2626 aa13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 RPL36AP83881 106 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 RPL36ALQ969Q0 106 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-202ENST00000389547 TRAV23DV6A0A075B6W5 121 aa13.89□□□□□ -0.19
PPFIA1-202ENST00000389547 SBSPONQ8IVN8 264 aa13.89□□□□□ -0.19
PPFIA1-202ENST00000389547 A0A0J9YX75 114 aa13.89□□□□□ -0.19
PPFIA1-202ENST00000389547 CRYGDP07320 174 aa13.89□□□□□ -0.19
PPFIA1-202ENST00000389547 IGHV4-4A0A075B6R2 117 aa13.89□□□□□ -0.19
PPFIA1-202ENST00000389547 GHRHP01286 108 aa13.88□□□□□ -0.19
PPFIA1-202ENST00000389547 MED14OSP0DP75 135 aa13.88□□□□□ -0.19
PPFIA1-202ENST00000389547 COX8CQ7Z4L0 72 aa13.88□□□□□ -0.19
PPFIA1-202ENST00000389547 K7EQG2 157 aa13.88□□□□□ -0.19
PPFIA1-202ENST00000389547 CMC4P56277 68 aaPredicted RBP13.88□□□□□ -0.19
PPFIA1-202ENST00000389547 POLR2KP53803 58 aaKnown RBP13.87□□□□□ -0.19
PPFIA1-202ENST00000389547 MALP21145 153 aa13.87□□□□□ -0.19
PPFIA1-202ENST00000389547 TIRAPP58753 221 aa13.87□□□□□ -0.19
PPFIA1-202ENST00000389547 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
PPFIA1-202ENST00000389547 LINC01546A6NGU7 62 aa13.86□□□□□ -0.19
PPFIA1-202ENST00000389547 LECT2O14960 151 aa13.86□□□□□ -0.19
PPFIA1-202ENST00000389547 TMEM258P61165 79 aa13.86□□□□□ -0.19
PPFIA1-202ENST00000389547 CDKN2A-AS1Q9UH64 79 aa13.85□□□□□ -0.19
PPFIA1-202ENST00000389547 RPL18AQ02543 176 aaKnown RBP13.85□□□□□ -0.19
PPFIA1-202ENST00000389547 DEFB114Q30KQ6 69 aa13.84□□□□□ -0.19
PPFIA1-202ENST00000389547 SERP2Q8N6R1 65 aa13.84□□□□□ -0.19
PPFIA1-202ENST00000389547 ESM1Q9NQ30 184 aa13.84□□□□□ -0.19
PPFIA1-202ENST00000389547 C6orf226Q5I0X4 101 aa13.84□□□□□ -0.19
PPFIA1-202ENST00000389547 SND1-IT1Q9HBX3 110 aa13.84□□□□□ -0.19
PPFIA1-202ENST00000389547 TRBV27A0A0K0K1C4 114 aa13.83□□□□□ -0.19
PPFIA1-202ENST00000389547 TSHBP01222 138 aa13.83□□□□□ -0.19
PPFIA1-202ENST00000389547 PRM2P04554 102 aa13.83□□□□□ -0.19
PPFIA1-202ENST00000389547 VSIG2Q96IQ7 327 aa13.83□□□□□ -0.19
PPFIA1-202ENST00000389547 MGAM2Q2M2H8 2515 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 HRNRQ86YZ3 2850 aaPredicted RBP13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 HILS1P60008 231 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 A0A087WVE0 104 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 USP17L23D6RBM5 183 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 ADAMTSL4-AS1Q5T5F5 129 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 U3KQE9 123 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 MAP6D1Q9H9H5 199 aa13.83□□□□□ -0.2
PPFIA1-202ENST00000389547 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
PPFIA1-202ENST00000389547 TRBV7-7A0A0K0K1E9 115 aa13.82□□□□□ -0.2
PPFIA1-202ENST00000389547 LINC00308Q8TCZ7 52 aa13.82□□□□□ -0.2
PPFIA1-202ENST00000389547 NOP10Q9NPE3 64 aaKnown RBP13.81□□□□□ -0.2
PPFIA1-202ENST00000389547 BRK1Q8WUW1 75 aa13.81□□□□□ -0.2
PPFIA1-202ENST00000389547 POM121L12Q8N7R1 296 aa13.8□□□□□ -0.2
PPFIA1-202ENST00000389547 A0A0U1RQV1 116 aa13.8□□□□□ -0.2
PPFIA1-202ENST00000389547 M0QY20 66 aa13.8□□□□□ -0.2
PPFIA1-202ENST00000389547 CELSR2Q9HCU4 2923 aa13.8□□□□□ -0.2
PPFIA1-202ENST00000389547 SMG1Q96Q15 3661 aaKnown RBP13.8□□□□□ -0.2
PPFIA1-202ENST00000389547 PIK3CD-AS1Q5SR53 167 aa13.79□□□□□ -0.2
PPFIA1-202ENST00000389547 DCANP1Q8TF63 244 aa13.79□□□□□ -0.2
PPFIA1-202ENST00000389547 WFDC10AQ9H1F0 79 aa13.79□□□□□ -0.2
PPFIA1-202ENST00000389547 ORMDL1Q9P0S3 153 aa13.79□□□□□ -0.2
PPFIA1-202ENST00000389547 NCR3O14931 201 aa13.76□□□□□ -0.21
PPFIA1-202ENST00000389547 SLPIP03973 132 aa13.76□□□□□ -0.21
PPFIA1-202ENST00000389547 FAM236DA0A1B0GTK5 79 aa13.76□□□□□ -0.21
PPFIA1-202ENST00000389547 FAM236CP0DP71 79 aa13.76□□□□□ -0.21
PPFIA1-202ENST00000389547 MIR7-3HGQ8N6C7 128 aa13.76□□□□□ -0.21
PPFIA1-202ENST00000389547 CXCL5P42830 114 aa13.75□□□□□ -0.21
PPFIA1-202ENST00000389547 H0YGX0 51 aa13.75□□□□□ -0.21
PPFIA1-202ENST00000389547 DEFB4AO15263 64 aa13.75□□□□□ -0.21
PPFIA1-202ENST00000389547 A0A096LNT2 108 aa13.75□□□□□ -0.21
PPFIA1-202ENST00000389547 PROK1P58294 105 aa13.74□□□□□ -0.21
PPFIA1-202ENST00000389547 KIR2DL5BQ8NHK3 375 aa13.74□□□□□ -0.21
PPFIA1-202ENST00000389547 A0A096LPF7 62 aa13.73□□□□□ -0.21
PPFIA1-202ENST00000389547 TRAV25A0A0B4J276 109 aa13.73□□□□□ -0.21
PPFIA1-202ENST00000389547 UBR5O95071 2799 aaPredicted RBP13.73□□□□□ -0.21
PPFIA1-202ENST00000389547 WFDC9Q8NEX5 89 aa13.73□□□□□ -0.21
PPFIA1-202ENST00000389547 TRBV6-5A0A0K0K1A5 114 aa13.72□□□□□ -0.21
PPFIA1-202ENST00000389547 C4orf26Q17RF5 130 aa13.72□□□□□ -0.21
PPFIA1-202ENST00000389547 C9orf66Q5T8R8 295 aa13.72□□□□□ -0.21
PPFIA1-202ENST00000389547 ENHOQ6UWT2 76 aa13.72□□□□□ -0.21
PPFIA1-202ENST00000389547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.72□□□□□ -0.21
PPFIA1-202ENST00000389547 LINC00467Q9BRT7 94 aa13.71□□□□□ -0.21
PPFIA1-202ENST00000389547 APCP25054 2843 aa13.71□□□□□ -0.21
PPFIA1-202ENST00000389547 BRI3O95415 125 aa13.7□□□□□ -0.22
PPFIA1-202ENST00000389547 DEFB135Q30KP9 77 aa13.7□□□□□ -0.22
PPFIA1-202ENST00000389547 LINC00482Q8N8I6 264 aa13.7□□□□□ -0.22
PPFIA1-202ENST00000389547 C5orf38Q86SI9 138 aa13.69□□□□□ -0.22
PPFIA1-202ENST00000389547 NDUFA1O15239 70 aa13.68□□□□□ -0.22
PPFIA1-202ENST00000389547 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-202ENST00000389547 MRPS36P82909 103 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-202ENST00000389547 UPK3BQ9BT76 320 aa13.67□□□□□ -0.22
PPFIA1-202ENST00000389547 DAD1P61803 113 aa13.66□□□□□ -0.22
PPFIA1-202ENST00000389547 COL6A5A8TX70 2615 aa13.65□□□□□ -0.22
PPFIA1-202ENST00000389547 MPLKIPQ8TAP9 179 aa13.65□□□□□ -0.22
PPFIA1-202ENST00000389547 FSHBP01225 129 aa13.65□□□□□ -0.22
PPFIA1-202ENST00000389547 NDUFC2O95298 119 aa13.65□□□□□ -0.22
PPFIA1-202ENST00000389547 SNURFQ9Y675 71 aa13.65□□□□□ -0.22
PPFIA1-202ENST00000389547 ODF3L2Q3SX64 289 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms