RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 NDUFA11Q86Y39 141 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 C16orf74Q96GX8 76 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 A0A0J9YXY3 114 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 RPL36AP83881 106 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 COX6A2Q02221 97 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 RPL36ALQ969Q0 106 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
PDLIM5-204ENST00000380176 TRGV2A0A075B6R0 118 aa5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 UBE2D3P61077 147 aa5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 UBE2D2P62837 147 aa5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 CDKN2A-AS1Q9UH64 79 aa5.65□□□□□ -1.5
PDLIM5-204ENST00000380176 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.51
PDLIM5-204ENST00000380176 A0A1B0GX51 115 aa5.65□□□□□ -1.51
PDLIM5-204ENST00000380176 VSIG2Q96IQ7 327 aa5.65□□□□□ -1.51
PDLIM5-204ENST00000380176 WFDC2Q14508 124 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 MUSTN1Q8IVN3 82 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 LITAFQ99732 161 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 TEX48A0A1B0GUV7 120 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 SBSPONQ8IVN8 264 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 OVOL2Q9BRP0 275 aa5.64□□□□□ -1.51
PDLIM5-204ENST00000380176 PRYO14603 147 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 DAZ4Q86SG3 579 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 DAZ3Q9NR90 486 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 ATRQ13535 2644 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 LOC107984156A0A0G2JMH3 177 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 VPREB1P12018 145 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 LINC00242Q5T6M2 205 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 ARL17AQ8IVW1 177 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 NDUFA12Q9UI09 145 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 J3KT08 172 aa5.63□□□□□ -1.51
PDLIM5-204ENST00000380176 TRAV13-1A0A0B4J241 112 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 CRLF1O75462 422 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 FHL2Q14192 279 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 TMEM101Q96IK0 257 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 PRO0461Q9UI25 63 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 IGLV5-45A0A087WSX0 123 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 NPC2P61916 151 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 SH2D6Q7Z4S9 175 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 TEP1Q99973 2627 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-204ENST00000380176 TRBV6-4A0A1B0GX49 114 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 F8W1H4 67 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 PRO1854Q9UHT4 67 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 DEFB130BP0DP73 79 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 DEFB130AP0DP74 79 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 PSMB2P49721 201 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 RETNQ9HD89 108 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 PRSS2P07478 247 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 DAND5Q8N907 189 aa5.61□□□□□ -1.51
PDLIM5-204ENST00000380176 H7C2G1 150 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 TMEM243Q9BU79 118 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 TCL1BO95988 128 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 IGHV3-33P01772 117 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 HERVK_113P63121 156 aa5.6□□□□□ -1.51
PDLIM5-204ENST00000380176 UBE2L6O14933 153 aa5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 IGLV5-39A0A0G2JS06 123 aa5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 SMIM1B2RUZ4 78 aa5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 ZNF625Q96I27 306 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-204ENST00000380176 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.52
PDLIM5-204ENST00000380176 A0A0B4J2C4 111 aa5.59□□□□□ -1.52
PDLIM5-204ENST00000380176 SPANXDQ9BXN6 97 aa5.59□□□□□ -1.52
PDLIM5-204ENST00000380176 TRBV6-8A0A0A6YYG3 113 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 NDUFA1O15239 70 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 MIAQ16674 131 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 Q9H8V8 135 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 C9JAW5 83 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 DEFB4AO15263 64 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 INSL3P51460 131 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 C9orf66Q5T8R8 295 aa5.58□□□□□ -1.52
PDLIM5-204ENST00000380176 LINC00612Q8N6U2 182 aa5.57□□□□□ -1.52
PDLIM5-204ENST00000380176 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-204ENST00000380176 SCGB1C2P0DMR2 95 aa5.57□□□□□ -1.52
PDLIM5-204ENST00000380176 DEFB135Q30KP9 77 aa5.57□□□□□ -1.52
PDLIM5-204ENST00000380176 LINC00336Q6ZUF6 198 aa5.57□□□□□ -1.52
PDLIM5-204ENST00000380176 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 CHCHD5Q9BSY4 110 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 FAM222AQ5U5X8 452 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 A0A096LPF7 62 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 XGP55808 180 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 Q1RN00 199 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 Q6Q795 121 aa5.56□□□□□ -1.52
PDLIM5-204ENST00000380176 H7C423 109 aa5.55□□□□□ -1.52
PDLIM5-204ENST00000380176 TIMM17BO60830 172 aa5.55□□□□□ -1.52
PDLIM5-204ENST00000380176 LINC01620Q4KN68 170 aa5.55□□□□□ -1.52
PDLIM5-204ENST00000380176 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
PDLIM5-204ENST00000380176 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
PDLIM5-204ENST00000380176 LYRM7Q5U5X0 104 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms