RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DNAJC30Q96LL9 226 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 SPANXA1Q9NS26 97 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 TIMM21Q9BVV7 248 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 XCL2Q9UBD3 114 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 IGLV5-39A0A0G2JS06 123 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 SRSF9Q13242 221 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDKL5-202ENST00000379996 ZFAND6Q6FIF0 208 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 TEN1Q86WV5 123 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 B9D2Q9BPU9 175 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 TIMM17BO60830 172 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 LGALS3P17931 250 aaKnown RBP5.43□□□□□ -1.54
CDKL5-202ENST00000379996 Q6ZUT4 128 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 Q8NAQ8 132 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 LINC01587Q99440 93 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 SIGMAR1Q99720 223 aa5.43□□□□□ -1.54
CDKL5-202ENST00000379996 TRAV8-3A0A0A6YYJ7 113 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 APOMO95445 188 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV3-73A0A0B4J1V6 119 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 PSMB2P49721 201 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 VCX2Q9H322 139 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 PPDPFQ9H3Y8 114 aa5.42□□□□□ -1.54
CDKL5-202ENST00000379996 WNK1Q9H4A3 2382 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 MIAQ16674 131 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 GTSF1LQ9H1H1 148 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 CSDC2Q9Y534 153 aaKnown RBP5.41□□□□□ -1.54
CDKL5-202ENST00000379996 PKD1L1Q8TDX9 2849 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV3OR16-12A0A075B7B8 117 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 LINC00694P0DN24 101 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 ANKRD29Q8N6D5 301 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 F5H768 121 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 NDUFA1O15239 70 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 COX6A2Q02221 97 aa5.41□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.54
CDKL5-202ENST00000379996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-202ENST00000379996 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-202ENST00000379996 RPL13AP40429 203 aaKnown RBP5.4□□□□□ -1.54
CDKL5-202ENST00000379996 PPDPFLQ8WWR9 84 aa5.4□□□□□ -1.54
CDKL5-202ENST00000379996 XGP55808 180 aa5.4□□□□□ -1.55
CDKL5-202ENST00000379996 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.55
CDKL5-202ENST00000379996 SORL1Q92673 2214 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 DEFB135Q30KP9 77 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 LYRM7Q5U5X0 104 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 SFTA2Q6UW10 78 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 DNAH9Q9NYC9 4486 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 HUWE1Q7Z6Z7 4374 aaKnown RBP5.39□□□□□ -1.55
CDKL5-202ENST00000379996 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.39□□□□□ -1.55
CDKL5-202ENST00000379996 LINC00242Q5T6M2 205 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 TMEM101Q96IK0 257 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 LOC107984156A0A0G2JMH3 177 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 DEFB121Q5J5C9 76 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 ARL17AQ8IVW1 177 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 MRAPQ8TCY5 172 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 ZNF625Q96I27 306 aaPredicted RBP5.39□□□□□ -1.55
CDKL5-202ENST00000379996 TNFRSF18Q9Y5U5 241 aa5.39□□□□□ -1.55
CDKL5-202ENST00000379996 IGHV4-28A0A0C4DH34 117 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 J3QR89 54 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 TRAV4A0A0B4J268 109 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 NDUFA12Q9UI09 145 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 SMIM1B2RUZ4 78 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 SLC25A20O43772 301 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 MT-ATP8P03928 68 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 SMAGPQ0VAQ4 97 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
CDKL5-202ENST00000379996 SOSTDC1Q6X4U4 206 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 IGHV3-38A0A0C4DH36 116 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 LINC01620Q4KN68 170 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 C22orf24Q9Y442 160 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
CDKL5-202ENST00000379996 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 H7C423 109 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 TRBV10-2A0A0K0K1G8 114 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 K7EQD1 137 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 SPART-AS1P0CW21 52 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 IFITM1P13164 125 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 CDC42SE2Q9NRR3 84 aa5.36□□□□□ -1.55
CDKL5-202ENST00000379996 LST1O00453 97 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
CDKL5-202ENST00000379996 H3BNG1 76 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 ATXN8Q156A1 80 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 Q6ZTI0 123 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 Q8N3U1 123 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 NOP10Q9NPE3 64 aaKnown RBP5.35□□□□□ -1.55
CDKL5-202ENST00000379996 C9JAW5 83 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 PRB2P02812 416 aaPredicted RBP5.35□□□□□ -1.55
CDKL5-202ENST00000379996 HTN1P15515 57 aa5.35□□□□□ -1.55
CDKL5-202ENST00000379996 DAZ4Q86SG3 579 aaKnown RBP5.34□□□□□ -1.55
CDKL5-202ENST00000379996 LINC00308Q8TCZ7 52 aa5.34□□□□□ -1.55
CDKL5-202ENST00000379996 DAZ3Q9NR90 486 aaKnown RBP5.34□□□□□ -1.55
CDKL5-202ENST00000379996 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
CDKL5-202ENST00000379996 FAM222AQ5U5X8 452 aa5.34□□□□□ -1.55
CDKL5-202ENST00000379996 HERVK_113P63121 156 aa5.33□□□□□ -1.56
CDKL5-202ENST00000379996 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
CDKL5-202ENST00000379996 RETNQ9HD89 108 aa5.33□□□□□ -1.56
CDKL5-202ENST00000379996 TRGV1A0A0A0MS02 117 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms