RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 A0A0B4J2C4 111 aa13.74□□□□□ -0.21
SSU72-204ENST00000378726 FHL2Q14192 279 aa13.74□□□□□ -0.21
SSU72-204ENST00000378726 RNF183Q96D59 192 aa13.74□□□□□ -0.21
SSU72-204ENST00000378726 LINC00612Q8N6U2 182 aa13.73□□□□□ -0.21
SSU72-204ENST00000378726 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
SSU72-204ENST00000378726 IGHV3-30-3P0DP02 117 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
SSU72-204ENST00000378726 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 C9JAW5 83 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 SLC25A20O43772 301 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 ZFAND6Q6FIF0 208 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
SSU72-204ENST00000378726 ANAPC13Q9BS18 74 aa13.72□□□□□ -0.21
SSU72-204ENST00000378726 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
SSU72-204ENST00000378726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.71□□□□□ -0.21
SSU72-204ENST00000378726 IGKV2-29A2NJV5 120 aaPredicted RBP13.71□□□□□ -0.21
SSU72-204ENST00000378726 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.22
SSU72-204ENST00000378726 DEFB4AO15263 64 aa13.71□□□□□ -0.22
SSU72-204ENST00000378726 LOC100131303A0A0U1RQF7 123 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 M0QXV9 152 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 EGFEM1PQ0D2K5 195 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 FAM222AQ5U5X8 452 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 LITAFQ99732 161 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 TIMM21Q9BVV7 248 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 PKD1L1Q8TDX9 2849 aa13.7□□□□□ -0.22
SSU72-204ENST00000378726 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
SSU72-204ENST00000378726 CMYA5Q8N3K9 4069 aa13.69□□□□□ -0.22
SSU72-204ENST00000378726 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.69□□□□□ -0.22
SSU72-204ENST00000378726 IGHV4-28A0A0C4DH34 117 aa13.69□□□□□ -0.22
SSU72-204ENST00000378726 UBE2D4Q9Y2X8 147 aa13.69□□□□□ -0.22
SSU72-204ENST00000378726 LYRM9A8MSI8 78 aa13.68□□□□□ -0.22
SSU72-204ENST00000378726 Q1RN00 199 aa13.68□□□□□ -0.22
SSU72-204ENST00000378726 NTM-AS1Q6ZSK4 140 aa13.68□□□□□ -0.22
SSU72-204ENST00000378726 SPANXA1Q9NS26 97 aa13.67□□□□□ -0.22
SSU72-204ENST00000378726 MIFP14174 115 aa13.67□□□□□ -0.22
SSU72-204ENST00000378726 ADAMTSL4-AS1Q5T5F5 129 aa13.67□□□□□ -0.22
SSU72-204ENST00000378726 IGHV1-58A0A0C4DH39 117 aa13.66□□□□□ -0.22
SSU72-204ENST00000378726 A8MZ25 164 aa13.66□□□□□ -0.22
SSU72-204ENST00000378726 GAGE6Q13070 117 aa13.66□□□□□ -0.22
SSU72-204ENST00000378726 Q8NAQ8 132 aa13.66□□□□□ -0.22
SSU72-204ENST00000378726 PRSS2P07478 247 aa13.65□□□□□ -0.22
SSU72-204ENST00000378726 TRIAP1O43715 76 aa13.64□□□□□ -0.23
SSU72-204ENST00000378726 ATXN8Q156A1 80 aa13.64□□□□□ -0.23
SSU72-204ENST00000378726 NDUFA12Q9UI09 145 aa13.64□□□□□ -0.23
SSU72-204ENST00000378726 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
SSU72-204ENST00000378726 DGAT2L7PQ6IED9 249 aa13.63□□□□□ -0.23
SSU72-204ENST00000378726 VSIG2Q96IQ7 327 aa13.63□□□□□ -0.23
SSU72-204ENST00000378726 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 NPC2P61916 151 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 NTN5Q8WTR8 489 aaPredicted RBP13.62□□□□□ -0.23
SSU72-204ENST00000378726 LINC00694P0DN24 101 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 SPANXDQ9BXN6 97 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 SPANXCQ9NY87 97 aa13.62□□□□□ -0.23
SSU72-204ENST00000378726 DAD1P61803 113 aa13.61□□□□□ -0.23
SSU72-204ENST00000378726 GAGE2BQ13066 116 aa13.61□□□□□ -0.23
SSU72-204ENST00000378726 GAGE2EQ4V326 116 aa13.61□□□□□ -0.23
SSU72-204ENST00000378726 GAGE2DQ9UEU5 116 aa13.61□□□□□ -0.23
SSU72-204ENST00000378726 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
SSU72-204ENST00000378726 SNCGO76070 127 aa13.6□□□□□ -0.23
SSU72-204ENST00000378726 SS18L2Q9UHA2 77 aa13.6□□□□□ -0.23
SSU72-204ENST00000378726 CELA1Q9UNI1 258 aa13.6□□□□□ -0.23
SSU72-204ENST00000378726 GYPEP15421 78 aa13.6□□□□□ -0.23
SSU72-204ENST00000378726 SPART-AS1P0CW21 52 aa13.59□□□□□ -0.23
SSU72-204ENST00000378726 MIAQ16674 131 aa13.59□□□□□ -0.23
SSU72-204ENST00000378726 NHLRC4P0CG21 123 aaPredicted RBP13.59□□□□□ -0.23
SSU72-204ENST00000378726 TMEM243Q9BU79 118 aa13.59□□□□□ -0.23
SSU72-204ENST00000378726 ICOSQ9Y6W8 199 aa13.59□□□□□ -0.23
SSU72-204ENST00000378726 ANK2Q01484 3957 aa13.58□□□□□ -0.24
SSU72-204ENST00000378726 TRBV10-2A0A0K0K1G8 114 aa13.58□□□□□ -0.24
SSU72-204ENST00000378726 UBE2L6O14933 153 aa13.58□□□□□ -0.24
SSU72-204ENST00000378726 LINC01600Q96MT4 127 aa13.58□□□□□ -0.24
SSU72-204ENST00000378726 CSDC2Q9Y534 153 aaKnown RBP13.58□□□□□ -0.24
SSU72-204ENST00000378726 NDUFV3P56181 108 aaKnown RBP13.57□□□□□ -0.24
SSU72-204ENST00000378726 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
SSU72-204ENST00000378726 B5MCH6 92 aa13.56□□□□□ -0.24
SSU72-204ENST00000378726 PAX4O43316 350 aa13.56□□□□□ -0.24
SSU72-204ENST00000378726 TRBV6-8A0A0A6YYG3 113 aa13.56□□□□□ -0.24
SSU72-204ENST00000378726 ATP5G1P05496 136 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 Q6Q795 121 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 RETNQ9HD89 108 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 RPL13AP40429 203 aaKnown RBP13.55□□□□□ -0.24
SSU72-204ENST00000378726 TTC32Q5I0X7 151 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 DAND5Q8N907 189 aa13.55□□□□□ -0.24
SSU72-204ENST00000378726 H7C423 109 aa13.54□□□□□ -0.24
SSU72-204ENST00000378726 IFITM1P13164 125 aa13.54□□□□□ -0.24
SSU72-204ENST00000378726 CDC42SE2Q9NRR3 84 aa13.54□□□□□ -0.24
SSU72-204ENST00000378726 CLEC2BQ92478 149 aa13.53□□□□□ -0.24
SSU72-204ENST00000378726 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
SSU72-204ENST00000378726 C2orf82Q6UX34 121 aa13.52□□□□□ -0.24
SSU72-204ENST00000378726 TRAV8-4A0A0B4J246 113 aa13.52□□□□□ -0.25
SSU72-204ENST00000378726 F5H768 121 aa13.52□□□□□ -0.25
SSU72-204ENST00000378726 COX6A2Q02221 97 aa13.52□□□□□ -0.25
SSU72-204ENST00000378726 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
SSU72-204ENST00000378726 DNAH3Q8TD57 4116 aa13.52□□□□□ -0.25
SSU72-204ENST00000378726 A0A096LPF7 62 aa13.51□□□□□ -0.25
SSU72-204ENST00000378726 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
SSU72-204ENST00000378726 NOTCH1P46531 2555 aa13.5□□□□□ -0.25
SSU72-204ENST00000378726 TIMM17BO60830 172 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms