RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NRACQ8N912 160 aa10.78□□□□□ -0.68
PRDM16-203ENST00000378391 RPS28P62857 69 aaKnown RBP10.78□□□□□ -0.68
PRDM16-203ENST00000378391 KIR2DL5BQ8NHK3 375 aa10.78□□□□□ -0.68
PRDM16-203ENST00000378391 ZNF706Q9Y5V0 76 aaPredicted RBP10.78□□□□□ -0.68
PRDM16-203ENST00000378391 PRO3102Q9H379 93 aa10.77□□□□□ -0.69
PRDM16-203ENST00000378391 RAI1Q7Z5J4 1906 aaPredicted RBP10.76□□□□□ -0.69
PRDM16-203ENST00000378391 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
PRDM16-203ENST00000378391 DEFB4AO15263 64 aa10.76□□□□□ -0.69
PRDM16-203ENST00000378391 PRYO14603 147 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 ESRGQ1W209 222 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 SPAG11AQ6PDA7 123 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 OTOGLQ3ZCN5 2332 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 REG3AQ06141 175 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
PRDM16-203ENST00000378391 PLAC8L1A1L4L8 177 aa10.74□□□□□ -0.69
PRDM16-203ENST00000378391 LINC00269Q8N2A0 174 aa10.74□□□□□ -0.69
PRDM16-203ENST00000378391 BEAN1Q3B7T3 259 aa10.74□□□□□ -0.69
PRDM16-203ENST00000378391 TMEM254Q8TBM7 123 aa10.74□□□□□ -0.69
PRDM16-203ENST00000378391 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
PRDM16-203ENST00000378391 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
PRDM16-203ENST00000378391 RNASE3P12724 160 aaKnown RBP10.73□□□□□ -0.69
PRDM16-203ENST00000378391 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
PRDM16-203ENST00000378391 MRGPRG-AS1Q2M3A8 158 aa10.73□□□□□ -0.69
PRDM16-203ENST00000378391 CHCHD10Q8WYQ3 142 aaPredicted RBP10.72□□□□□ -0.69
PRDM16-203ENST00000378391 C11orf21Q9P2W6 132 aa10.72□□□□□ -0.69
PRDM16-203ENST00000378391 MYO9AB2RTY4 2548 aa10.72□□□□□ -0.69
PRDM16-203ENST00000378391 Q6YL49 198 aa10.72□□□□□ -0.69
PRDM16-203ENST00000378391 Q8N6K4 173 aa10.72□□□□□ -0.69
PRDM16-203ENST00000378391 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
PRDM16-203ENST00000378391 TRBV6-4A0A1B0GX49 114 aa10.71□□□□□ -0.69
PRDM16-203ENST00000378391 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
PRDM16-203ENST00000378391 FAM30AQ9NZY2 134 aa10.71□□□□□ -0.69
PRDM16-203ENST00000378391 TRBV7-7A0A0K0K1E9 115 aa10.71□□□□□ -0.7
PRDM16-203ENST00000378391 SPINT4Q6UDR6 99 aa10.71□□□□□ -0.7
PRDM16-203ENST00000378391 LST1O00453 97 aa10.71□□□□□ -0.7
PRDM16-203ENST00000378391 TRBV6-8A0A0A6YYG3 113 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 TSHBP01222 138 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 LIMD2Q9BT23 127 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 KLLNB2CW77 178 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 C8orf87E5RJ46 101 aa10.7□□□□□ -0.7
PRDM16-203ENST00000378391 PCSK5Q92824 1860 aa10.69□□□□□ -0.7
PRDM16-203ENST00000378391 SLPIP03973 132 aa10.69□□□□□ -0.7
PRDM16-203ENST00000378391 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
PRDM16-203ENST00000378391 DNAH14Q0VDD8 3507 aa10.68□□□□□ -0.7
PRDM16-203ENST00000378391 C11orf71Q6IPW1 123 aa10.68□□□□□ -0.7
PRDM16-203ENST00000378391 PRR9Q5T870 116 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 IL17DQ8TAD2 202 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 A0A087WVE0 104 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 PROK1P58294 105 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 WFDC13Q8IUB5 93 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 CCDC168Q8NDH2 2452 aa10.67□□□□□ -0.7
PRDM16-203ENST00000378391 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
PRDM16-203ENST00000378391 POM121L12Q8N7R1 296 aa10.66□□□□□ -0.7
PRDM16-203ENST00000378391 Q6ZS46 218 aa10.65□□□□□ -0.7
PRDM16-203ENST00000378391 COX8CQ7Z4L0 72 aa10.65□□□□□ -0.7
PRDM16-203ENST00000378391 HIVEP3Q5T1R4 2406 aa10.65□□□□□ -0.71
PRDM16-203ENST00000378391 C19orf84I3L1E1 186 aa10.65□□□□□ -0.71
PRDM16-203ENST00000378391 RETNLBQ9BQ08 111 aa10.65□□□□□ -0.71
PRDM16-203ENST00000378391 CCKP06307 115 aa10.64□□□□□ -0.71
PRDM16-203ENST00000378391 UBE2D4Q9Y2X8 147 aa10.64□□□□□ -0.71
PRDM16-203ENST00000378391 UBE2D2P62837 147 aa10.64□□□□□ -0.71
PRDM16-203ENST00000378391 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
PRDM16-203ENST00000378391 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
PRDM16-203ENST00000378391 CDH23Q9H251 3354 aa10.63□□□□□ -0.71
PRDM16-203ENST00000378391 Q6ZQY7 126 aa10.63□□□□□ -0.71
PRDM16-203ENST00000378391 IGHV4-30-4P0DP06 118 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 TRANK1O15050 2925 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 H3BS24 57 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 LINC00208Q96KT6 92 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 IGLV2-18A0A075B6J9 118 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
PRDM16-203ENST00000378391 C14orf177Q52M58 125 aa10.61□□□□□ -0.71
PRDM16-203ENST00000378391 UBE2D1P51668 147 aa10.61□□□□□ -0.71
PRDM16-203ENST00000378391 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
PRDM16-203ENST00000378391 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
PRDM16-203ENST00000378391 C3orf84H3BNL1 204 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 C10orf99Q6UWK7 81 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 C11orf45Q8TAV5 145 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 PRM2P04554 102 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 CD164L2Q6UWJ8 174 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 CRYGAP11844 174 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 Q6ZSV7 163 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 ARHGAP32A7KAX9 2087 aa10.6□□□□□ -0.71
PRDM16-203ENST00000378391 RANBP2P49792 3224 aaKnown RBP10.59□□□□□ -0.71
PRDM16-203ENST00000378391 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
PRDM16-203ENST00000378391 PIEZO2Q9H5I5 2752 aa10.59□□□□□ -0.71
PRDM16-203ENST00000378391 ABCA2Q9BZC7 2435 aa10.59□□□□□ -0.71
PRDM16-203ENST00000378391 A0A087WZ39 114 aa10.59□□□□□ -0.71
PRDM16-203ENST00000378391 PTPRBP23467 1997 aa10.58□□□□□ -0.72
PRDM16-203ENST00000378391 IGKV2-24A0A0C4DH68 120 aa10.58□□□□□ -0.72
PRDM16-203ENST00000378391 SMIM11BQ8TCY0 68 aa10.58□□□□□ -0.72
PRDM16-203ENST00000378391 TRBV10-3A0A0K0K1G6 114 aa10.58□□□□□ -0.72
PRDM16-203ENST00000378391 LINC01546A6NGU7 62 aa10.58□□□□□ -0.72
PRDM16-203ENST00000378391 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
PRDM16-203ENST00000378391 SYCNQ0VAF6 134 aa10.56□□□□□ -0.72
PRDM16-203ENST00000378391 MUC7Q8TAX7 377 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms