RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 UNQ6190/PRO20217Q6UXQ8 127 aa4.7□□□□□ -1.66
UBR4-204ENST00000375254 SMIM29Q86T20 159 aa4.7□□□□□ -1.66
UBR4-204ENST00000375254 NCOA6Q14686 2063 aaPredicted RBP4.7□□□□□ -1.66
UBR4-204ENST00000375254 SMCR5Q8TEV8 140 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 SLURP1P55000 103 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 Q8NBF4 154 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 ATAD5Q96QE3 1844 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 IGHV4-61A0A0C4DH41 118 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 FBXL19-AS1Q494R0 122 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 PHIPQ8WWQ0 1821 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 PRR3P79522 188 aaKnown RBP4.69□□□□□ -1.66
UBR4-204ENST00000375254 Q9BRP9 147 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 ABCA3Q99758 1704 aa4.69□□□□□ -1.66
UBR4-204ENST00000375254 LAMA4Q16363 1823 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 FAM215AQ9Y5M1 114 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 LYPD5Q6UWN5 251 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 IGHV3OR16-9A0A0B4J2B5 98 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 KIF25-AS1Q9Y6Z4 181 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 PLCH1Q4KWH8 1693 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 FHL3Q13643 280 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 MARF1Q9Y4F3 1742 aaKnown RBP4.68□□□□□ -1.66
UBR4-204ENST00000375254 Q75L30 129 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 ZNF580Q9UK33 172 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 A0A087WSZ3 146 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 PLA2G5P39877 138 aa4.68□□□□□ -1.66
UBR4-204ENST00000375254 C1orf229Q6ZS94 237 aaPredicted RBP4.68□□□□□ -1.66
UBR4-204ENST00000375254 ANKHD1Q8IWZ3 2542 aaKnown RBP4.67□□□□□ -1.66
UBR4-204ENST00000375254 OBSCN-AS1Q96MR7 158 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 PHLPP1O60346 1717 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 SRCAPQ6ZRS2 3230 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 Q5XG85 94 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 ARAP2Q8WZ64 1704 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 HCFC1P51610 2035 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 RNF223E7ERA6 249 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 LAMB1P07942 1786 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 COL4A5P29400 1685 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 KIAA0087Q14695 138 aa4.67□□□□□ -1.66
UBR4-204ENST00000375254 COL14A1Q05707 1796 aaKnown RBP4.66□□□□□ -1.66
UBR4-204ENST00000375254 DDX60Q8IY21 1712 aaKnown RBP4.66□□□□□ -1.66
UBR4-204ENST00000375254 ACANP16112 2415 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 IGHV6-1A0A0B4J1U7 121 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 RICTORQ6R327 1708 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 A8MWP4 228 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 IGKV2-28A0A075B6P5 120 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 IGKV2D-28P01615 120 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 UBR2Q8IWV8 1755 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 WISP2O76076 250 aa4.66□□□□□ -1.66
UBR4-204ENST00000375254 THADAQ6YHU6 1953 aa4.65□□□□□ -1.66
UBR4-204ENST00000375254 C11orf45Q8TAV5 145 aa4.65□□□□□ -1.66
UBR4-204ENST00000375254 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.67
UBR4-204ENST00000375254 FAM218AQ96MZ4 157 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 DOCK1Q14185 1865 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 PATJQ8NI35 1801 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 WDR81Q562E7 1941 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 COL18A1P39060 1754 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 LINC00315P59091 139 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 CDSNQ15517 529 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 U3KQA8 63 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 C7orf33Q8WU49 177 aa4.65□□□□□ -1.67
UBR4-204ENST00000375254 ANKRD36CQ5JPF3 1778 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 DEFB1P60022 68 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 A0A096LNI7 61 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 FER1L4A9Z1Z3 1794 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 F8W735 103 aaPredicted RBP4.64□□□□□ -1.67
UBR4-204ENST00000375254 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 LRRK2Q5S007 2527 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 NCKAP5O14513 1909 aa4.64□□□□□ -1.67
UBR4-204ENST00000375254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.63□□□□□ -1.67
UBR4-204ENST00000375254 LITAFQ99732 161 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.63□□□□□ -1.67
UBR4-204ENST00000375254 PRR9Q5T870 116 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 ALS2Q96Q42 1657 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 GRNP28799 593 aaKnown RBP4.63□□□□□ -1.67
UBR4-204ENST00000375254 LY6G6DO95868 133 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 TLN2Q9Y4G6 2542 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 A0A087X002 238 aa4.63□□□□□ -1.67
UBR4-204ENST00000375254 ADAMTSL3P82987 1691 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 KIAA1551Q9HCM1 1747 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 BCORQ6W2J9 1755 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 DEFB116Q30KQ4 102 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 QSER1Q2KHR3 1735 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 FAM229AH3BQW9 127 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 PCNX3Q9H6A9 2034 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
UBR4-204ENST00000375254 AHDC1Q5TGY3 1603 aaPredicted RBP4.61□□□□□ -1.67
UBR4-204ENST00000375254 IGLV1-40P01703 118 aa4.61□□□□□ -1.67
UBR4-204ENST00000375254 MOBPQ13875 183 aa4.61□□□□□ -1.67
UBR4-204ENST00000375254 LMO4P61968 165 aa4.61□□□□□ -1.67
UBR4-204ENST00000375254 Q6YL49 198 aa4.61□□□□□ -1.67
UBR4-204ENST00000375254 PKD1L2Q7Z442 2459 aa4.61□□□□□ -1.67
UBR4-204ENST00000375254 STRCP1A6NGW2 1772 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 FSHBP01225 129 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 NCOR2Q9Y618 2525 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 A0A1B0GUL6 1792 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 DEFB131BA0A096LNP1 70 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 LINC00167Q96N53 147 aa4.6□□□□□ -1.67
UBR4-204ENST00000375254 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms