RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
HLA-DQA1-202ENST00000374949 DNAH5Q8TE73 4624 aa7.42□□□□□ -1.22
HLA-DQA1-202ENST00000374949 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 UBE2D1P51668 147 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 MAJINQ3KP22 176 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 SPATA45Q537H7 98 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 MPV17L2Q567V2 206 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 LINC00588Q9Y4M8 146 aa7.41□□□□□ -1.22
HLA-DQA1-202ENST00000374949 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 CCL18P55774 89 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 SEC11AP67812 179 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 FAM19A3Q7Z5A8 133 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 STPG4Q8N801 248 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 KRTAP1-5Q9BYS1 174 aa7.4□□□□□ -1.22
HLA-DQA1-202ENST00000374949 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
HLA-DQA1-202ENST00000374949 ANGP03950 147 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-202ENST00000374949 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
HLA-DQA1-202ENST00000374949 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
HLA-DQA1-202ENST00000374949 GEMIN7Q9H840 131 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 CCL25O15444 150 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 SS18Q15532 418 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 WFDC10BQ8IUB3 73 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-202ENST00000374949 LINC00959A0A1B0GUT2 108 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGHV3-30P01768 117 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGHV3-33P01772 117 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGHV3-30-3P0DP02 117 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGHV3-30-5P0DP03 117 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 HERVK_113P61574 105 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 HERVK_113P63121 156 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 PRO1933Q9H354 126 aa7.37□□□□□ -1.23
HLA-DQA1-202ENST00000374949 TSTD3H0UI37 97 aa7.36□□□□□ -1.23
HLA-DQA1-202ENST00000374949 COX6A2Q02221 97 aa7.36□□□□□ -1.23
HLA-DQA1-202ENST00000374949 REG3AQ06141 175 aa7.36□□□□□ -1.23
HLA-DQA1-202ENST00000374949 Q8N3U1 123 aa7.36□□□□□ -1.23
HLA-DQA1-202ENST00000374949 KLK12Q9UKR0 248 aa7.36□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGLV5-45A0A087WSX0 123 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 TMEM223A0PJW6 202 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 E9PLD3 99 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 H3BRM9 83 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 SIVA1O15304 175 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 TTC32Q5I0X7 151 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 LINC01556Q5JQF7 62 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 LINC00469Q8N7U9 141 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 Q9H8V8 135 aa7.35□□□□□ -1.23
HLA-DQA1-202ENST00000374949 DNAH10OSP0CZ25 163 aa7.34□□□□□ -1.23
HLA-DQA1-202ENST00000374949 NMUP48645 174 aa7.34□□□□□ -1.23
HLA-DQA1-202ENST00000374949 CLPSL2Q6UWE3 100 aa7.34□□□□□ -1.23
HLA-DQA1-202ENST00000374949 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
HLA-DQA1-202ENST00000374949 CDKN2A-AS1Q9UH64 79 aa7.34□□□□□ -1.23
HLA-DQA1-202ENST00000374949 IGKV2D-26A0A0A0MRZ7 120 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 EPM2AB3EWF7 344 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 LEPROTO15243 131 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 COX8AP10176 69 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 FUSP35637 526 aaKnown RBP eCLIP7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 ENHOQ6UWT2 76 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 UQCR10Q9UDW1 63 aa7.33□□□□□ -1.24
HLA-DQA1-202ENST00000374949 TRAV8-4A0A0B4J246 113 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 PCP4L1A6NKN8 68 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 CRPP02741 224 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 XCL1P47992 114 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 CHCHD10Q8WYQ3 142 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
HLA-DQA1-202ENST00000374949 FLG2Q5D862 2391 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IGHV1-58A0A0C4DH39 117 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 DLEU1O43261 78 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 SPINK8P0C7L1 97 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 INAFM2P0DMQ5 153 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 MIAQ16674 131 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 CD164L2Q6UWJ8 174 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IGLV10-54A0A075B6I4 117 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 A0A087WZ39 114 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 J3QQQ9 107 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 LGALS3P17931 250 aaKnown RBP7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 C5orf38Q86SI9 138 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 TRAV8-3A0A0A6YYJ7 113 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 GAGE12HA6NDE8 117 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
HLA-DQA1-202ENST00000374949 K7EP13 123 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms