RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 IGLV1-51P01701 117 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 GAGE2BQ13066 116 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 MIAQ16674 131 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 POM121L12Q8N7R1 296 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
CLIC4-201ENST00000374379 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
CLIC4-201ENST00000374379 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
CLIC4-201ENST00000374379 INSL3P51460 131 aa9.75□□□□□ -0.85
CLIC4-201ENST00000374379 TRBV6-8A0A0A6YYG3 113 aa9.75□□□□□ -0.85
CLIC4-201ENST00000374379 G3V4G9 280 aa9.75□□□□□ -0.85
CLIC4-201ENST00000374379 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
CLIC4-201ENST00000374379 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 COX6A2Q02221 97 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 DPH3Q96FX2 82 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 FSHBP01225 129 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 IFITM1P13164 125 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
CLIC4-201ENST00000374379 TEN1Q86WV5 123 aa9.74□□□□□ -0.85
CLIC4-201ENST00000374379 EDA2RQ9HAV5 297 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 FBN2P35556 2912 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 MRPS36P82909 103 aaKnown RBP9.73□□□□□ -0.85
CLIC4-201ENST00000374379 FOXI1Q12951 378 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 Q8N2B8 174 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 UBE2D1P51668 147 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 COX7A2LO14548 114 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 HERV-K104P63124 156 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
CLIC4-201ENST00000374379 TRBV6-4A0A1B0GX49 114 aa9.72□□□□□ -0.85
CLIC4-201ENST00000374379 TRIAP1O43715 76 aa9.72□□□□□ -0.85
CLIC4-201ENST00000374379 UBE2D3P61077 147 aa9.72□□□□□ -0.85
CLIC4-201ENST00000374379 UBE2D2P62837 147 aa9.72□□□□□ -0.85
CLIC4-201ENST00000374379 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
CLIC4-201ENST00000374379 SPANXB1Q9NS25 103 aaPredicted RBP9.71□□□□□ -0.85
CLIC4-201ENST00000374379 PRB2P02812 416 aaPredicted RBP9.71□□□□□ -0.85
CLIC4-201ENST00000374379 ADAMTSL4-AS1Q5T5F5 129 aa9.71□□□□□ -0.85
CLIC4-201ENST00000374379 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.85
CLIC4-201ENST00000374379 UFSP1Q6NVU6 142 aa9.71□□□□□ -0.86
CLIC4-201ENST00000374379 IGKV2D-24A0A075B6R9 120 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 IGHV4-28A0A0C4DH34 117 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 LINC00308Q8TCZ7 52 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 LAMTOR3Q9UHA4 124 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 IGLV4-60A0A075B6I1 120 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 CDC42SE2Q9NRR3 84 aa9.7□□□□□ -0.86
CLIC4-201ENST00000374379 TIRAPP58753 221 aa9.69□□□□□ -0.86
CLIC4-201ENST00000374379 TEX49A0A1B0GTD5 131 aa9.68□□□□□ -0.86
CLIC4-201ENST00000374379 A0A0B4J2C4 111 aa9.68□□□□□ -0.86
CLIC4-201ENST00000374379 NOTCH1P46531 2555 aa9.68□□□□□ -0.86
CLIC4-201ENST00000374379 CRYBA4P53673 196 aa9.68□□□□□ -0.86
CLIC4-201ENST00000374379 BEAN1Q3B7T3 259 aa9.68□□□□□ -0.86
CLIC4-201ENST00000374379 AMELXQ99217 191 aa9.67□□□□□ -0.86
CLIC4-201ENST00000374379 NDUFA1O15239 70 aa9.67□□□□□ -0.86
CLIC4-201ENST00000374379 REG3AQ06141 175 aa9.67□□□□□ -0.86
CLIC4-201ENST00000374379 C15orf53Q8NAA6 179 aa9.67□□□□□ -0.86
CLIC4-201ENST00000374379 APCP25054 2843 aa9.67□□□□□ -0.86
CLIC4-201ENST00000374379 NCR3O14931 201 aa9.66□□□□□ -0.86
CLIC4-201ENST00000374379 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CLIC4-201ENST00000374379 LECT2O14960 151 aa9.65□□□□□ -0.86
CLIC4-201ENST00000374379 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.86
CLIC4-201ENST00000374379 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
CLIC4-201ENST00000374379 RETNQ9HD89 108 aa9.65□□□□□ -0.86
CLIC4-201ENST00000374379 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
CLIC4-201ENST00000374379 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.87
CLIC4-201ENST00000374379 FHL3Q13643 280 aa9.65□□□□□ -0.87
CLIC4-201ENST00000374379 FHL2Q14192 279 aa9.65□□□□□ -0.87
CLIC4-201ENST00000374379 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
CLIC4-201ENST00000374379 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
CLIC4-201ENST00000374379 HIST1H4AP62805 103 aaKnown RBP9.64□□□□□ -0.87
CLIC4-201ENST00000374379 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
CLIC4-201ENST00000374379 C16orf95Q9H693 158 aa9.64□□□□□ -0.87
CLIC4-201ENST00000374379 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
CLIC4-201ENST00000374379 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 LYRM9A8MSI8 78 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 KRTAP1-3Q8IUG1 177 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 CLUHP3Q96NS8 147 aa9.63□□□□□ -0.87
CLIC4-201ENST00000374379 CUBNO60494 3623 aa9.62□□□□□ -0.87
CLIC4-201ENST00000374379 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
CLIC4-201ENST00000374379 SLPIP03973 132 aa9.61□□□□□ -0.87
CLIC4-201ENST00000374379 CR1P17927 2039 aa9.61□□□□□ -0.87
CLIC4-201ENST00000374379 PSCAO43653 123 aa9.61□□□□□ -0.87
CLIC4-201ENST00000374379 XAGE1AQ9HD64 81 aa9.61□□□□□ -0.87
CLIC4-201ENST00000374379 MT-ATP8P03928 68 aa9.6□□□□□ -0.87
CLIC4-201ENST00000374379 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
CLIC4-201ENST00000374379 MXRA5Q9NR99 2828 aa9.6□□□□□ -0.87
CLIC4-201ENST00000374379 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
CLIC4-201ENST00000374379 NBEAL1Q6ZS30 2694 aa9.59□□□□□ -0.87
CLIC4-201ENST00000374379 INAFM2P0DMQ5 153 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms