RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
PRPF4-202ENST00000374199 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
PRPF4-202ENST00000374199 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
PRPF4-202ENST00000374199 NOTCH3Q9UM47 2321 aa8.68□□□□□ -1.02
PRPF4-202ENST00000374199 IGLL5B9A064 214 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 K7EP34 96 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 ATP5G1P05496 136 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 SPINK8P0C7L1 97 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 C3orf56Q8N813 242 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 K7ERJ3 54 aa8.67□□□□□ -1.02
PRPF4-202ENST00000374199 UBE2L6O14933 153 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 PAX4O43316 350 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
PRPF4-202ENST00000374199 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 A6NJY4 79 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 DAD1P61803 113 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 DGAT2L7PQ6IED9 249 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 NHP2Q9NX24 153 aaKnown RBP8.66□□□□□ -1.02
PRPF4-202ENST00000374199 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
PRPF4-202ENST00000374199 A0A0B4J2C4 111 aa8.65□□□□□ -1.02
PRPF4-202ENST00000374199 A0A087WZ39 114 aa8.65□□□□□ -1.02
PRPF4-202ENST00000374199 CFC1BP0CG36 223 aa8.65□□□□□ -1.02
PRPF4-202ENST00000374199 CFC1P0CG37 223 aa8.65□□□□□ -1.02
PRPF4-202ENST00000374199 GTF2H5Q6ZYL4 71 aa8.65□□□□□ -1.02
PRPF4-202ENST00000374199 MIAQ16674 131 aa8.65□□□□□ -1.03
PRPF4-202ENST00000374199 ADAMTSL4-AS1Q5T5F5 129 aa8.65□□□□□ -1.03
PRPF4-202ENST00000374199 A0A096LPF7 62 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 LINC00959A0A1B0GUT2 108 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 GAGE6Q13070 117 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 DEFB4AO15263 64 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 NBEAL2Q6ZNJ1 2754 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 G3V4G9 280 aa8.63□□□□□ -1.03
PRPF4-202ENST00000374199 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
PRPF4-202ENST00000374199 IFITM1P13164 125 aa8.62□□□□□ -1.03
PRPF4-202ENST00000374199 LELP1Q5T871 98 aa8.62□□□□□ -1.03
PRPF4-202ENST00000374199 HERV-K104P63124 156 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 SPCS1Q9Y6A9 102 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 DNAH9Q9NYC9 4486 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 TRAV13-1A0A0B4J241 112 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 TSPAN13O95857 204 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
PRPF4-202ENST00000374199 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
PRPF4-202ENST00000374199 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
PRPF4-202ENST00000374199 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
PRPF4-202ENST00000374199 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
PRPF4-202ENST00000374199 ICOSQ9Y6W8 199 aa8.6□□□□□ -1.03
PRPF4-202ENST00000374199 FLNBO75369 2602 aaKnown RBP8.6□□□□□ -1.03
PRPF4-202ENST00000374199 FABP2P12104 132 aa8.59□□□□□ -1.03
PRPF4-202ENST00000374199 SFTA2Q6UW10 78 aa8.59□□□□□ -1.03
PRPF4-202ENST00000374199 A4D1N5 150 aa8.59□□□□□ -1.03
PRPF4-202ENST00000374199 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
PRPF4-202ENST00000374199 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
PRPF4-202ENST00000374199 RETNQ9HD89 108 aa8.58□□□□□ -1.04
PRPF4-202ENST00000374199 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
PRPF4-202ENST00000374199 IGHV3-33P01772 117 aa8.58□□□□□ -1.04
PRPF4-202ENST00000374199 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 Q9H8V8 135 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
PRPF4-202ENST00000374199 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
PRPF4-202ENST00000374199 Q8IZM0 81 aa8.56□□□□□ -1.04
PRPF4-202ENST00000374199 STAB1Q9NY15 2570 aa8.56□□□□□ -1.04
PRPF4-202ENST00000374199 CD164L2Q6UWJ8 174 aa8.56□□□□□ -1.04
PRPF4-202ENST00000374199 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
PRPF4-202ENST00000374199 K7EIL1 84 aa8.55□□□□□ -1.04
PRPF4-202ENST00000374199 FOXI1Q12951 378 aa8.55□□□□□ -1.04
PRPF4-202ENST00000374199 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
PRPF4-202ENST00000374199 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
PRPF4-202ENST00000374199 SS18Q15532 418 aa8.54□□□□□ -1.04
PRPF4-202ENST00000374199 DNAH7Q8WXX0 4024 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 TRBV30A0A0K0K1B3 111 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 M0QXV9 152 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 KRTAP26-1Q6PEX3 210 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 Q6ZTC4 211 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 Q8N3U1 123 aa8.53□□□□□ -1.04
PRPF4-202ENST00000374199 TENM3Q9P273 2699 aa8.52□□□□□ -1.04
PRPF4-202ENST00000374199 IBA57-AS1B1ANH7 110 aa8.52□□□□□ -1.04
PRPF4-202ENST00000374199 REG3AQ06141 175 aa8.52□□□□□ -1.04
PRPF4-202ENST00000374199 MTURNQ8N3F0 131 aa8.52□□□□□ -1.04
PRPF4-202ENST00000374199 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
PRPF4-202ENST00000374199 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
PRPF4-202ENST00000374199 F8W1H4 67 aa8.52□□□□□ -1.05
PRPF4-202ENST00000374199 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
PRPF4-202ENST00000374199 WFDC2Q14508 124 aa8.52□□□□□ -1.05
PRPF4-202ENST00000374199 LINC00269Q8N2A0 174 aa8.52□□□□□ -1.05
PRPF4-202ENST00000374199 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
PRPF4-202ENST00000374199 SPATA25Q9BR10 227 aa8.51□□□□□ -1.05
PRPF4-202ENST00000374199 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
PRPF4-202ENST00000374199 TRBV20-1A0A075B6N2 111 aa8.5□□□□□ -1.05
PRPF4-202ENST00000374199 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
PRPF4-202ENST00000374199 APOMO95445 188 aa8.5□□□□□ -1.05
PRPF4-202ENST00000374199 H3BMG7 143 aa8.49□□□□□ -1.05
PRPF4-202ENST00000374199 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms