RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 A0A1B0GV90 55 aa11.93□□□□□ -0.5
C9orf43-202ENST00000374165 TINCRA0A1B0GVN0 87 aa11.93□□□□□ -0.5
C9orf43-202ENST00000374165 SMAGPQ0VAQ4 97 aa11.93□□□□□ -0.5
C9orf43-202ENST00000374165 HIGD1BQ9P298 99 aa11.93□□□□□ -0.5
C9orf43-202ENST00000374165 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
C9orf43-202ENST00000374165 COL5A1-AS1Q5SY13 56 aa11.92□□□□□ -0.5
C9orf43-202ENST00000374165 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 IGHV3-30-3P0DP02 117 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 TSPEAR-AS2P59090 65 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 KMT2AQ03164 3969 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
C9orf43-202ENST00000374165 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
C9orf43-202ENST00000374165 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
C9orf43-202ENST00000374165 ZNF815PA8K554 130 aa11.9□□□□□ -0.5
C9orf43-202ENST00000374165 ZNF25P17030 456 aaPredicted RBP11.9□□□□□ -0.5
C9orf43-202ENST00000374165 HSD52Q0P140 79 aa11.89□□□□□ -0.51
C9orf43-202ENST00000374165 UBE2DNLQ8IWF7 75 aa11.89□□□□□ -0.51
C9orf43-202ENST00000374165 Q9H8V8 135 aa11.89□□□□□ -0.51
C9orf43-202ENST00000374165 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
C9orf43-202ENST00000374165 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
C9orf43-202ENST00000374165 J3QQQ9 107 aa11.88□□□□□ -0.51
C9orf43-202ENST00000374165 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
C9orf43-202ENST00000374165 LINC00469Q8N7U9 141 aa11.88□□□□□ -0.51
C9orf43-202ENST00000374165 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 COX6A2Q02221 97 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 LEPROTO15243 131 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
C9orf43-202ENST00000374165 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 FAM19A3Q7Z5A8 133 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 KLK12Q9UKR0 248 aa11.87□□□□□ -0.51
C9orf43-202ENST00000374165 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
C9orf43-202ENST00000374165 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
C9orf43-202ENST00000374165 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
C9orf43-202ENST00000374165 PLEKHB2Q96CS7 222 aa11.86□□□□□ -0.51
C9orf43-202ENST00000374165 HERVK_113P63121 156 aa11.85□□□□□ -0.51
C9orf43-202ENST00000374165 SCGB1D4Q6XE38 83 aa11.85□□□□□ -0.51
C9orf43-202ENST00000374165 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
C9orf43-202ENST00000374165 ORAOV1Q8WV07 137 aa11.84□□□□□ -0.51
C9orf43-202ENST00000374165 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
C9orf43-202ENST00000374165 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
C9orf43-202ENST00000374165 SEC11AP67812 179 aa11.84□□□□□ -0.51
C9orf43-202ENST00000374165 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
C9orf43-202ENST00000374165 GCSHP23434 173 aa11.82□□□□□ -0.52
C9orf43-202ENST00000374165 HYDINQ4G0P3 5121 aa11.82□□□□□ -0.52
C9orf43-202ENST00000374165 REG3AQ06141 175 aa11.82□□□□□ -0.52
C9orf43-202ENST00000374165 Q6ZVH6 145 aa11.82□□□□□ -0.52
C9orf43-202ENST00000374165 PRR34Q9NV39 138 aa11.82□□□□□ -0.52
C9orf43-202ENST00000374165 H3BRM9 83 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 K7EP13 123 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 LY6G6CO95867 125 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 FXYD2P54710 66 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 CEND1Q8N111 149 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 TAL2Q16559 108 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 TM2D2Q9BX73 214 aa11.81□□□□□ -0.52
C9orf43-202ENST00000374165 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
C9orf43-202ENST00000374165 IGLV10-54A0A075B6I4 117 aa11.79□□□□□ -0.52
C9orf43-202ENST00000374165 DNAH10Q8IVF4 4471 aa11.79□□□□□ -0.52
C9orf43-202ENST00000374165 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
C9orf43-202ENST00000374165 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
C9orf43-202ENST00000374165 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
C9orf43-202ENST00000374165 A6NDN8 102 aa11.77□□□□□ -0.52
C9orf43-202ENST00000374165 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.52
C9orf43-202ENST00000374165 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
C9orf43-202ENST00000374165 M0R2N4 97 aa11.77□□□□□ -0.53
C9orf43-202ENST00000374165 KMT2CQ8NEZ4 4911 aaKnown RBP11.77□□□□□ -0.53
C9orf43-202ENST00000374165 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 PTTG1IPP53801 180 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 Q9HAA7 133 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 NDUFA12Q9UI09 145 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 ALMS1Q8TCU4 4167 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
C9orf43-202ENST00000374165 COX11Q9Y6N1 276 aa11.76□□□□□ -0.53
C9orf43-202ENST00000374165 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
C9orf43-202ENST00000374165 SACSQ9NZJ4 4579 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 CRPP02741 224 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 SPANXB1Q9NS25 103 aaPredicted RBP11.74□□□□□ -0.53
C9orf43-202ENST00000374165 CCL25O15444 150 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 XCL1P47992 114 aa11.74□□□□□ -0.53
C9orf43-202ENST00000374165 NHP2Q9NX24 153 aaKnown RBP11.73□□□□□ -0.53
C9orf43-202ENST00000374165 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
C9orf43-202ENST00000374165 MIAQ16674 131 aa11.72□□□□□ -0.53
C9orf43-202ENST00000374165 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
C9orf43-202ENST00000374165 K7ERJ3 54 aa11.71□□□□□ -0.53
C9orf43-202ENST00000374165 SS18Q15532 418 aa11.71□□□□□ -0.53
C9orf43-202ENST00000374165 NDUFA1O15239 70 aa11.7□□□□□ -0.54
C9orf43-202ENST00000374165 SMIM13P0DJ93 91 aa11.7□□□□□ -0.54
C9orf43-202ENST00000374165 RAB37Q96AX2 223 aa11.7□□□□□ -0.54
C9orf43-202ENST00000374165 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
C9orf43-202ENST00000374165 Q6ZR54 194 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms