RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 DAND5Q8N907 189 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 C4orf3Q8WVX3 66 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 CHCHD7Q9BUK0 85 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 GTSF1LQ9H1H1 148 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 M0R2P5 195 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 TCL1BO95988 128 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 SPINK8P0C7L1 97 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 IGHV3-30-3P0DP02 117 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 HERVK_113P61574 105 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 RHOHQ15669 191 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 ADAMTSL4-AS1Q5T5F5 129 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 Q8N2B8 174 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 LINC00694P0DN24 101 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 Q6ZVQ6 151 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 MUSTN1Q8IVN3 82 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 C1orf158Q8N1D5 194 aa4.57□□□□□ -1.68
CHD6-202ENST00000373222 SMIM9A6NGZ8 99 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 Q6ZTI0 123 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 UBE2D4Q9Y2X8 147 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 TRGV1A0A0A0MS02 117 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 A8MTW9 85 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 F8W1H4 67 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 LEPROTO15243 131 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 UBE2D3P61077 147 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 UBE2D2P62837 147 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 COX6A2Q02221 97 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 SMR3AQ99954 134 aa4.56□□□□□ -1.68
CHD6-202ENST00000373222 NHLRC4P0CG21 123 aaPredicted RBP4.55□□□□□ -1.68
CHD6-202ENST00000373222 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 ZNF625Q96I27 306 aaPredicted RBP4.55□□□□□ -1.68
CHD6-202ENST00000373222 LITAFQ99732 161 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 CDKN2A-AS1Q9UH64 79 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 A8MWV9 139 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 PRSS2P07478 247 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 SPATA3Q8NHX4 192 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
CHD6-202ENST00000373222 ANK2Q01484 3957 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 INSP01308 110 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
CHD6-202ENST00000373222 RPL35AP18077 110 aaKnown RBP4.54□□□□□ -1.68
CHD6-202ENST00000373222 MRPS36P82909 103 aaKnown RBP4.54□□□□□ -1.68
CHD6-202ENST00000373222 NTM-AS1Q6ZSK4 140 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 CARD19Q96LW7 228 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 TMEM263Q8WUH6 116 aaKnown RBP4.54□□□□□ -1.68
CHD6-202ENST00000373222 Q9HAA7 133 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 NOP10Q9NPE3 64 aaKnown RBP4.54□□□□□ -1.68
CHD6-202ENST00000373222 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
CHD6-202ENST00000373222 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 SCGB1C2P0DMR2 95 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 CD164Q04900 197 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 NDUFA12Q9UI09 145 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 FOXI1Q12951 378 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 GAGE4Q13068 117 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 GAGE5Q13069 117 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 LINC01006Q8NI28 216 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 VSIG2Q96IQ7 327 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 PYGO1Q9Y3Y4 419 aa4.53□□□□□ -1.68
CHD6-202ENST00000373222 FBN1P35555 2871 aaKnown RBP4.53□□□□□ -1.68
CHD6-202ENST00000373222 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 IGHV1-58A0A0C4DH39 117 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 FLNBO75369 2602 aaKnown RBP4.52□□□□□ -1.69
CHD6-202ENST00000373222 GAGE7O76087 117 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 GAGE12FP0CL80 117 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 GAGE12GP0CL81 117 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 GAGE12IP0CL82 117 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 Q1RN00 199 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 C1QTNF4Q9BXJ3 329 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 EDA2RQ9HAV5 297 aa4.52□□□□□ -1.69
CHD6-202ENST00000373222 STAB1Q9NY15 2570 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 IGKV3OR2-268A0A0C4DH90 116 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 C9JAW5 83 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 LINC00242Q5T6M2 205 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 TENM3Q9P273 2699 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 CLEC2BQ92478 149 aa4.51□□□□□ -1.69
CHD6-202ENST00000373222 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 K7EQD1 137 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 KRTAP10-3P60369 221 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 FAM19A5Q7Z5A7 132 aaPredicted RBP4.5□□□□□ -1.69
CHD6-202ENST00000373222 SMIM20Q8N5G0 67 aa4.5□□□□□ -1.69
CHD6-202ENST00000373222 SLC25A20O43772 301 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 NOTCH1P46531 2555 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 TRGV2A0A075B6R0 118 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 A0A0B4J2C4 111 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 TEX49A0A1B0GTD5 131 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 CDK2AP2O75956 126 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 MIAQ16674 131 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 ZFAND6Q6FIF0 208 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 TEN1Q86WV5 123 aa4.49□□□□□ -1.69
CHD6-202ENST00000373222 IGHV4-28A0A0C4DH34 117 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms