RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
C9orf78-201ENST00000372447 STARD9Q9P2P6 4700 aa11.15□□□□□ -0.62
C9orf78-201ENST00000372447 NAA38Q9BRA0 125 aaKnown RBP11.14□□□□□ -0.63
C9orf78-201ENST00000372447 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
C9orf78-201ENST00000372447 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 ATP5G1P05496 136 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 TMEM101Q96IK0 257 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 TRBV6-8A0A0A6YYG3 113 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 HTN3P15516 51 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
C9orf78-201ENST00000372447 TMEM238LA0A1B0GVL6 79 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 A6NJY4 79 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 HERVK_113P63121 156 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 PRO0255Q9UI72 69 aa11.12□□□□□ -0.63
C9orf78-201ENST00000372447 A0A1W2PPM0 123 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 GYPEP15421 78 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 COX6A2Q02221 97 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
C9orf78-201ENST00000372447 IGHV3-30P01768 117 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 IGHV3-30-5P0DP03 117 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
C9orf78-201ENST00000372447 PLECQ15149 4684 aaKnown RBP11.1□□□□□ -0.63
C9orf78-201ENST00000372447 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
C9orf78-201ENST00000372447 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
C9orf78-201ENST00000372447 F5H768 121 aa11.1□□□□□ -0.63
C9orf78-201ENST00000372447 ATP6V0E2Q8NHE4 81 aa11.1□□□□□ -0.63
C9orf78-201ENST00000372447 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
C9orf78-201ENST00000372447 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
C9orf78-201ENST00000372447 GAGE6Q13070 117 aa11.09□□□□□ -0.63
C9orf78-201ENST00000372447 CASC10Q5T4H9 136 aa11.09□□□□□ -0.63
C9orf78-201ENST00000372447 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
C9orf78-201ENST00000372447 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 IGLL5B9A064 214 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 FABP2P12104 132 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 CHCHD5Q9BSY4 110 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 K7EP34 96 aa11.08□□□□□ -0.64
C9orf78-201ENST00000372447 PAX4O43316 350 aa11.07□□□□□ -0.64
C9orf78-201ENST00000372447 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
C9orf78-201ENST00000372447 KLK5Q9Y337 293 aaPredicted RBP11.05□□□□□ -0.64
C9orf78-201ENST00000372447 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
C9orf78-201ENST00000372447 TRAV26-1A0A087WT03 109 aa11.05□□□□□ -0.64
C9orf78-201ENST00000372447 IGLV5-39A0A0G2JS06 123 aa11.05□□□□□ -0.64
C9orf78-201ENST00000372447 LITAFQ99732 161 aa11.04□□□□□ -0.64
C9orf78-201ENST00000372447 TENM2Q9NT68 2774 aa11.04□□□□□ -0.64
C9orf78-201ENST00000372447 SMIM1B2RUZ4 78 aa11.03□□□□□ -0.64
C9orf78-201ENST00000372447 NDUFA1O15239 70 aa11.03□□□□□ -0.64
C9orf78-201ENST00000372447 APOMO95445 188 aa11.03□□□□□ -0.64
C9orf78-201ENST00000372447 A0A096LPF7 62 aa11.02□□□□□ -0.65
C9orf78-201ENST00000372447 CFC1BP0CG36 223 aa11.02□□□□□ -0.65
C9orf78-201ENST00000372447 CFC1P0CG37 223 aa11.02□□□□□ -0.65
C9orf78-201ENST00000372447 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
C9orf78-201ENST00000372447 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
C9orf78-201ENST00000372447 RPL24P83731 157 aaKnown RBP11.01□□□□□ -0.65
C9orf78-201ENST00000372447 APLNQ9ULZ1 77 aa11.01□□□□□ -0.65
C9orf78-201ENST00000372447 SPANXDQ9BXN6 97 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 SPANXCQ9NY87 97 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 A0A1B0GUV1 79 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 A4D1N5 150 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 TMEM262E9PQX1 116 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 H3BNG1 76 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 TIMM17BO60830 172 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 ADAMTSL4-AS1Q5T5F5 129 aa11□□□□□ -0.65
C9orf78-201ENST00000372447 TSPAN13O95857 204 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 RBX1P62877 108 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 MIAQ16674 131 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 Q9H8V8 135 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 LYSTQ99698 3801 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 PRSS2P07478 247 aa10.98□□□□□ -0.65
C9orf78-201ENST00000372447 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
C9orf78-201ENST00000372447 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
C9orf78-201ENST00000372447 A0A0B4J2C4 111 aa10.96□□□□□ -0.65
C9orf78-201ENST00000372447 LINC00959A0A1B0GUT2 108 aa10.96□□□□□ -0.65
C9orf78-201ENST00000372447 IGHV3OR16-9A0A0B4J2B5 98 aa10.95□□□□□ -0.66
C9orf78-201ENST00000372447 CIRBPQ14011 172 aaKnown RBP10.95□□□□□ -0.66
C9orf78-201ENST00000372447 MRPL23Q16540 153 aaKnown RBP10.95□□□□□ -0.66
C9orf78-201ENST00000372447 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
C9orf78-201ENST00000372447 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
C9orf78-201ENST00000372447 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
C9orf78-201ENST00000372447 IFITM1P13164 125 aa10.94□□□□□ -0.66
C9orf78-201ENST00000372447 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
C9orf78-201ENST00000372447 HERV-K104P63124 156 aa10.93□□□□□ -0.66
C9orf78-201ENST00000372447 A0A087WZ39 114 aa10.93□□□□□ -0.66
C9orf78-201ENST00000372447 SS18Q15532 418 aa10.93□□□□□ -0.66
C9orf78-201ENST00000372447 COX7B2Q8TF08 81 aa10.93□□□□□ -0.66
C9orf78-201ENST00000372447 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
C9orf78-201ENST00000372447 NPC2P61916 151 aa10.92□□□□□ -0.66
C9orf78-201ENST00000372447 DAND5Q8N907 189 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms