RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
PRPF38B-202ENST00000370022 C20orf202A1L168 122 aa10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 CHCHD10Q8WYQ3 142 aaPredicted RBP10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 OPRPNQ99935 248 aaPredicted RBP10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 A0A087WTM6 91 aa10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 TEX43Q6ZNM6 134 aa10.31□□□□□ -0.76
PRPF38B-202ENST00000370022 FRAS1Q86XX4 4008 aa10.3□□□□□ -0.76
PRPF38B-202ENST00000370022 A0A096LNJ9 63 aa10.3□□□□□ -0.76
PRPF38B-202ENST00000370022 HSBP1O75506 76 aa10.3□□□□□ -0.76
PRPF38B-202ENST00000370022 MAPKAPK5-AS1Q8N8E1 139 aa10.3□□□□□ -0.76
PRPF38B-202ENST00000370022 VCX2Q9H322 139 aa10.3□□□□□ -0.76
PRPF38B-202ENST00000370022 DNAH10Q8IVF4 4471 aa10.29□□□□□ -0.76
PRPF38B-202ENST00000370022 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
PRPF38B-202ENST00000370022 AMELXQ99217 191 aa10.29□□□□□ -0.76
PRPF38B-202ENST00000370022 DNAH17Q9UFH2 4485 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 GAGE12HA6NDE8 117 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 BAALCQ8WXS3 180 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 MIEN1Q9BRT3 115 aa10.28□□□□□ -0.76
PRPF38B-202ENST00000370022 A0A1B0GVY2 172 aa10.27□□□□□ -0.76
PRPF38B-202ENST00000370022 SERF1AO75920 110 aa10.27□□□□□ -0.76
PRPF38B-202ENST00000370022 XCL1P47992 114 aa10.27□□□□□ -0.76
PRPF38B-202ENST00000370022 PMCHL1Q16048 86 aa10.27□□□□□ -0.76
PRPF38B-202ENST00000370022 PDZD11Q5EBL8 140 aa10.27□□□□□ -0.76
PRPF38B-202ENST00000370022 FAT2Q9NYQ8 4349 aa10.27□□□□□ -0.77
PRPF38B-202ENST00000370022 ATP5LO75964 103 aa10.26□□□□□ -0.77
PRPF38B-202ENST00000370022 FOXI1Q12951 378 aa10.26□□□□□ -0.77
PRPF38B-202ENST00000370022 C14orf177Q52M58 125 aa10.26□□□□□ -0.77
PRPF38B-202ENST00000370022 Q8N814 137 aa10.26□□□□□ -0.77
PRPF38B-202ENST00000370022 UBE2D1P51668 147 aa10.25□□□□□ -0.77
PRPF38B-202ENST00000370022 LINC00310P59036 64 aa10.25□□□□□ -0.77
PRPF38B-202ENST00000370022 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
PRPF38B-202ENST00000370022 SEC11AP67812 179 aa10.24□□□□□ -0.77
PRPF38B-202ENST00000370022 UBE2V1Q13404 147 aa10.24□□□□□ -0.77
PRPF38B-202ENST00000370022 WFDC2Q14508 124 aa10.24□□□□□ -0.77
PRPF38B-202ENST00000370022 USP17L23D6RBM5 183 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 LECT2O14960 151 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 PMVKQ15126 192 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 PGPEP1Q9NXJ5 209 aa10.23□□□□□ -0.77
PRPF38B-202ENST00000370022 COX7A2LO14548 114 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 LINC00242Q5T6M2 205 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 ZC2HC1BQ5TFG8 222 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
PRPF38B-202ENST00000370022 IGHV3OR16-9A0A0B4J2B5 98 aa10.21□□□□□ -0.78
PRPF38B-202ENST00000370022 NUPR1O60356 82 aa10.21□□□□□ -0.78
PRPF38B-202ENST00000370022 LEPROTL1O95214 131 aa10.21□□□□□ -0.78
PRPF38B-202ENST00000370022 MALP21145 153 aa10.21□□□□□ -0.78
PRPF38B-202ENST00000370022 IGHV1-58A0A0C4DH39 117 aa10.2□□□□□ -0.78
PRPF38B-202ENST00000370022 HERVK_113P63121 156 aa10.2□□□□□ -0.78
PRPF38B-202ENST00000370022 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
PRPF38B-202ENST00000370022 APOMO95445 188 aa10.19□□□□□ -0.78
PRPF38B-202ENST00000370022 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
PRPF38B-202ENST00000370022 PRSS1P07477 247 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 C5orf38Q86SI9 138 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 A0A087WZ39 114 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 GVQW2A0A096LPI5 108 aaPredicted RBP10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 TINCRA0A1B0GVN0 87 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 hDV102S1A0JD36 115 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 LINC01561Q8N1V8 128 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 VPS25Q9BRG1 176 aa10.18□□□□□ -0.78
PRPF38B-202ENST00000370022 IGLV5-52A0A0A0MRZ9 124 aa10.17□□□□□ -0.78
PRPF38B-202ENST00000370022 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
PRPF38B-202ENST00000370022 A0A0J9YXV3 536 aa10.17□□□□□ -0.78
PRPF38B-202ENST00000370022 COX6A2Q02221 97 aa10.17□□□□□ -0.78
PRPF38B-202ENST00000370022 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
PRPF38B-202ENST00000370022 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.16□□□□□ -0.78
PRPF38B-202ENST00000370022 SCGB1D1O95968 90 aa10.16□□□□□ -0.78
PRPF38B-202ENST00000370022 PKD1P98161 4303 aa10.15□□□□□ -0.78
PRPF38B-202ENST00000370022 K7ERU9 68 aa10.15□□□□□ -0.78
PRPF38B-202ENST00000370022 HECTD4Q9Y4D8 3996 aa10.15□□□□□ -0.78
PRPF38B-202ENST00000370022 IGLV5-45A0A087WSX0 123 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 ZNF561-AS1K7EIQ3 104 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 IGLC3P0DOY3 106 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 SCGB1A1P11684 91 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
PRPF38B-202ENST00000370022 OCIAD2Q56VL3 154 aa10.13□□□□□ -0.79
PRPF38B-202ENST00000370022 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
PRPF38B-202ENST00000370022 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
PRPF38B-202ENST00000370022 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
PRPF38B-202ENST00000370022 GCSHP23434 173 aa10.12□□□□□ -0.79
PRPF38B-202ENST00000370022 RNF151Q2KHN1 245 aa10.12□□□□□ -0.79
PRPF38B-202ENST00000370022 MAP1LC3CQ9BXW4 147 aa10.12□□□□□ -0.79
PRPF38B-202ENST00000370022 DNAH11Q96DT5 4516 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms