RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 NCR3O14931 201 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 PKD1L2Q7Z442 2459 aa9.79□□□□□ -0.84
PTPRK-204ENST00000368210 TRBV6-5A0A0K0K1A5 114 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 SOSTDC1Q6X4U4 206 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 CHKB-CPT1BH3BT56 60 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 UBE2AP49459 152 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 INAFM1C9JVW0 142 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 NDUFA1O15239 70 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 PROK1P58294 105 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 PYGO1Q9Y3Y4 419 aa9.78□□□□□ -0.84
PTPRK-204ENST00000368210 GAS8-AS1O95177 125 aa9.77□□□□□ -0.84
PTPRK-204ENST00000368210 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.84
PTPRK-204ENST00000368210 LINC01006Q8NI28 216 aa9.77□□□□□ -0.84
PTPRK-204ENST00000368210 ZNF462Q96JM2 2506 aa9.77□□□□□ -0.85
PTPRK-204ENST00000368210 C18orf65Q6ZTR6 163 aa9.77□□□□□ -0.85
PTPRK-204ENST00000368210 F8W735 103 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-204ENST00000368210 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
PTPRK-204ENST00000368210 NDUFB1O75438 58 aa9.75□□□□□ -0.85
PTPRK-204ENST00000368210 COL4A2P08572 1712 aa9.75□□□□□ -0.85
PTPRK-204ENST00000368210 RAI1Q7Z5J4 1906 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-204ENST00000368210 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
PTPRK-204ENST00000368210 CRYGDP07320 174 aa9.74□□□□□ -0.85
PTPRK-204ENST00000368210 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
PTPRK-204ENST00000368210 POLQO75417 2590 aa9.74□□□□□ -0.85
PTPRK-204ENST00000368210 F8WDY8 70 aa9.74□□□□□ -0.85
PTPRK-204ENST00000368210 DEFB105AQ8NG35 78 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 FASNP49327 2511 aaKnown RBP9.73□□□□□ -0.85
PTPRK-204ENST00000368210 A0A087WVE0 104 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 ETDCA0A1B0GVM5 59 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 PRO0461Q9UI25 63 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 KRTAP10-9P60411 292 aa9.73□□□□□ -0.85
PTPRK-204ENST00000368210 TSHBP01222 138 aa9.72□□□□□ -0.85
PTPRK-204ENST00000368210 LINC00482Q8N8I6 264 aa9.72□□□□□ -0.85
PTPRK-204ENST00000368210 PRM2P04554 102 aa9.72□□□□□ -0.85
PTPRK-204ENST00000368210 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.85
PTPRK-204ENST00000368210 MRGPRG-AS1Q2M3A8 158 aa9.71□□□□□ -0.85
PTPRK-204ENST00000368210 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.86
PTPRK-204ENST00000368210 EDN2P20800 178 aa9.71□□□□□ -0.86
PTPRK-204ENST00000368210 REG3AQ06141 175 aa9.71□□□□□ -0.86
PTPRK-204ENST00000368210 DIRC1Q969H9 104 aa9.71□□□□□ -0.86
PTPRK-204ENST00000368210 LY6G6DO95868 133 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 SLPIP03973 132 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 HILS1P60008 231 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 NDUFS5O43920 106 aa9.7□□□□□ -0.86
PTPRK-204ENST00000368210 COX8CQ7Z4L0 72 aa9.69□□□□□ -0.86
PTPRK-204ENST00000368210 VPREB1P12018 145 aa9.68□□□□□ -0.86
PTPRK-204ENST00000368210 SMCPP49901 116 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-204ENST00000368210 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
PTPRK-204ENST00000368210 ADAMTS20P59510 1910 aa9.68□□□□□ -0.86
PTPRK-204ENST00000368210 CHCHD10Q8WYQ3 142 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-204ENST00000368210 BRI3O95415 125 aa9.68□□□□□ -0.86
PTPRK-204ENST00000368210 CCKP06307 115 aa9.67□□□□□ -0.86
PTPRK-204ENST00000368210 A0A096LNJ9 63 aa9.67□□□□□ -0.86
PTPRK-204ENST00000368210 TET2Q6N021 2002 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-204ENST00000368210 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
PTPRK-204ENST00000368210 ODF3L2Q3SX64 289 aa9.66□□□□□ -0.86
PTPRK-204ENST00000368210 CHD7Q9P2D1 2997 aa9.66□□□□□ -0.86
PTPRK-204ENST00000368210 A8MZ25 164 aa9.65□□□□□ -0.86
PTPRK-204ENST00000368210 BBC3Q96PG8 261 aaPredicted RBP9.65□□□□□ -0.86
PTPRK-204ENST00000368210 IBA57-AS1B1ANH7 110 aa9.65□□□□□ -0.87
PTPRK-204ENST00000368210 ESRGQ1W209 222 aa9.65□□□□□ -0.87
PTPRK-204ENST00000368210 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.87
PTPRK-204ENST00000368210 ZNF580Q9UK33 172 aa9.64□□□□□ -0.87
PTPRK-204ENST00000368210 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
PTPRK-204ENST00000368210 PRYO14603 147 aa9.64□□□□□ -0.87
PTPRK-204ENST00000368210 COX7BP24311 80 aa9.63□□□□□ -0.87
PTPRK-204ENST00000368210 ACANP16112 2415 aa9.63□□□□□ -0.87
PTPRK-204ENST00000368210 DEFB131BA0A096LNP1 70 aa9.62□□□□□ -0.87
PTPRK-204ENST00000368210 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
PTPRK-204ENST00000368210 PLA2G2AP14555 144 aa9.62□□□□□ -0.87
PTPRK-204ENST00000368210 PSPHP1O15172 72 aa9.61□□□□□ -0.87
PTPRK-204ENST00000368210 WIPF1O43516 503 aa9.61□□□□□ -0.87
PTPRK-204ENST00000368210 SBSPONQ8IVN8 264 aa9.61□□□□□ -0.87
PTPRK-204ENST00000368210 LRCOL1A6NCL2 159 aa9.61□□□□□ -0.87
PTPRK-204ENST00000368210 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
PTPRK-204ENST00000368210 PRR4Q16378 134 aa9.6□□□□□ -0.87
PTPRK-204ENST00000368210 ANKRD17O75179 2603 aaKnown RBP9.59□□□□□ -0.87
PTPRK-204ENST00000368210 SMIM11BQ8TCY0 68 aa9.59□□□□□ -0.87
PTPRK-204ENST00000368210 SMR3AQ99954 134 aa9.59□□□□□ -0.87
PTPRK-204ENST00000368210 PLAC8L1A1L4L8 177 aa9.58□□□□□ -0.88
PTPRK-204ENST00000368210 TMEM254Q8TBM7 123 aa9.58□□□□□ -0.88
PTPRK-204ENST00000368210 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
PTPRK-204ENST00000368210 BCE1O60756 84 aa9.57□□□□□ -0.88
PTPRK-204ENST00000368210 NHLRC4P0CG21 123 aaPredicted RBP9.57□□□□□ -0.88
PTPRK-204ENST00000368210 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
PTPRK-204ENST00000368210 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
PTPRK-204ENST00000368210 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
PTPRK-204ENST00000368210 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 Q8N3U1 123 aa9.56□□□□□ -0.88
PTPRK-204ENST00000368210 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms