RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 MT-ATP8P03928 68 aa12.42□□□□□ -0.42
TRIM11-202ENST00000366699 NPC2P61916 151 aa12.42□□□□□ -0.42
TRIM11-202ENST00000366699 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
TRIM11-202ENST00000366699 XGP55808 180 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 H7C423 109 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 TMEM243Q9BU79 118 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 CDC42SE2Q9NRR3 84 aa12.41□□□□□ -0.42
TRIM11-202ENST00000366699 Q9H8V8 135 aa12.4□□□□□ -0.42
TRIM11-202ENST00000366699 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
TRIM11-202ENST00000366699 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
TRIM11-202ENST00000366699 NIPBLQ6KC79 2804 aaeCLIP12.39□□□□□ -0.436e-6■■■□□ 16.7
TRIM11-202ENST00000366699 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
TRIM11-202ENST00000366699 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
TRIM11-202ENST00000366699 NOTCH3Q9UM47 2321 aa12.39□□□□□ -0.43
TRIM11-202ENST00000366699 TRBV10-2A0A0K0K1G8 114 aa12.38□□□□□ -0.43
TRIM11-202ENST00000366699 LY6G6DO95868 133 aa12.38□□□□□ -0.43
TRIM11-202ENST00000366699 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
TRIM11-202ENST00000366699 DAND5Q8N907 189 aa12.38□□□□□ -0.43
TRIM11-202ENST00000366699 HIVEP2P31629 2446 aa12.37□□□□□ -0.43
TRIM11-202ENST00000366699 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
TRIM11-202ENST00000366699 KRTAP10-3P60369 221 aa12.36□□□□□ -0.43
TRIM11-202ENST00000366699 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
TRIM11-202ENST00000366699 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
TRIM11-202ENST00000366699 NTN5Q8WTR8 489 aaPredicted RBP12.35□□□□□ -0.43
TRIM11-202ENST00000366699 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
TRIM11-202ENST00000366699 F5H768 121 aa12.35□□□□□ -0.43
TRIM11-202ENST00000366699 HERV-K104P63124 156 aa12.34□□□□□ -0.43
TRIM11-202ENST00000366699 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
TRIM11-202ENST00000366699 ZNF625Q96I27 306 aaPredicted RBP12.34□□□□□ -0.43
TRIM11-202ENST00000366699 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
TRIM11-202ENST00000366699 FHL2Q14192 279 aa12.34□□□□□ -0.43
TRIM11-202ENST00000366699 KIR2DL5BQ8NHK3 375 aa12.33□□□□□ -0.44
TRIM11-202ENST00000366699 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
TRIM11-202ENST00000366699 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 H3BT86 120 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 LST1O00453 97 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
TRIM11-202ENST00000366699 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
TRIM11-202ENST00000366699 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
TRIM11-202ENST00000366699 CRLF1O75462 422 aa12.31□□□□□ -0.44
TRIM11-202ENST00000366699 CLEC2BQ92478 149 aa12.31□□□□□ -0.44
TRIM11-202ENST00000366699 A0A0U1RRA0 63 aa12.3□□□□□ -0.44
TRIM11-202ENST00000366699 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
TRIM11-202ENST00000366699 PPDPFQ9H3Y8 114 aa12.3□□□□□ -0.44
TRIM11-202ENST00000366699 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
TRIM11-202ENST00000366699 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
TRIM11-202ENST00000366699 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
TRIM11-202ENST00000366699 TEX49A0A1B0GTD5 131 aa12.29□□□□□ -0.44
TRIM11-202ENST00000366699 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
TRIM11-202ENST00000366699 GAGE6Q13070 117 aa12.28□□□□□ -0.44
TRIM11-202ENST00000366699 SOSTDC1Q6X4U4 206 aa12.28□□□□□ -0.44
TRIM11-202ENST00000366699 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
TRIM11-202ENST00000366699 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
TRIM11-202ENST00000366699 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
TRIM11-202ENST00000366699 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
TRIM11-202ENST00000366699 COX7A2LO14548 114 aa12.25□□□□□ -0.45
TRIM11-202ENST00000366699 ANAPC13Q9BS18 74 aa12.25□□□□□ -0.45
TRIM11-202ENST00000366699 TRAV8-4A0A0B4J246 113 aa12.24□□□□□ -0.45
TRIM11-202ENST00000366699 X6R8D5 127 aa12.24□□□□□ -0.45
TRIM11-202ENST00000366699 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 LYRM9A8MSI8 78 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 CITED1Q99966 193 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 GYPEP15421 78 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 APOC4P55056 127 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
TRIM11-202ENST00000366699 FN1P02751 2386 aaKnown RBP12.21□□□□□ -0.45
TRIM11-202ENST00000366699 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
TRIM11-202ENST00000366699 HIVEP1P15822 2718 aa12.21□□□□□ -0.45
TRIM11-202ENST00000366699 IGHV3OR16-9A0A0B4J2B5 98 aa12.21□□□□□ -0.45
TRIM11-202ENST00000366699 NSD1Q96L73 2696 aaPredicted RBP12.21□□□□□ -0.46
TRIM11-202ENST00000366699 SNCGO76070 127 aa12.2□□□□□ -0.46
TRIM11-202ENST00000366699 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
TRIM11-202ENST00000366699 TOMM7Q9P0U1 55 aa12.2□□□□□ -0.46
TRIM11-202ENST00000366699 TRAV13-2A0A0B4J235 113 aa12.19□□□□□ -0.46
TRIM11-202ENST00000366699 A0A087WZ39 114 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 GAGE2BQ13066 116 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 MIR7-3HGQ8N6C7 128 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
TRIM11-202ENST00000366699 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
TRIM11-202ENST00000366699 FAM240AA0A1B0GVK7 77 aa12.17□□□□□ -0.46
TRIM11-202ENST00000366699 TRACP01848 142 aa12.17□□□□□ -0.46
TRIM11-202ENST00000366699 PAX4O43316 350 aa12.16□□□□□ -0.46
TRIM11-202ENST00000366699 CRPP02741 224 aa12.16□□□□□ -0.46
TRIM11-202ENST00000366699 LINC00158P58513 81 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 LINC00959A0A1B0GUT2 108 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 SS18Q15532 418 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 DEFB135Q30KP9 77 aa12.15□□□□□ -0.46
TRIM11-202ENST00000366699 RPL28P46779 137 aaKnown RBP12.14□□□□□ -0.47
TRIM11-202ENST00000366699 C5orf38Q86SI9 138 aa12.14□□□□□ -0.47
TRIM11-202ENST00000366699 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
TRIM11-202ENST00000366699 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
TRIM11-202ENST00000366699 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms