RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 MGPP08493 103 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 NEFHP12036 1026 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 RPL22P35268 128 aaKnown RBP-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 C10orf113Q5VZT2 155 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 LINC01600Q96MT4 127 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 SPRR4Q96PI1 79 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 MRPL34Q9BQ48 92 aaKnown RBP-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 GINS3Q9BRX5 216 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 LENEPQ9Y5L5 61 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 PRDM2Q13029 1718 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 RAPGEF6Q8TEU7 1601 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 KIF21AQ7Z4S6 1674 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 PSPHP78330 225 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 CCL8P80075 99 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 SPA17Q15506 151 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 LTC4SQ16873 150 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 LELP1Q5T871 98 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 LINC01545Q5VT33 79 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 TPT1P8Q9HAU6 139 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 CBLN4Q9NTU7 201 aa-2.18□□□□□ -2.76
RNU6-54P-201ENST00000365563 TIAM2Q8IVF5 1701 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 SMIM23A6NLE4 172 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 M0QZK8 103 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 CSN2P05814 226 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 S100A11P31949 105 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 UBE2G1P62253 170 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 TMED4Q7Z7H5 227 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 C9orf16Q9BUW7 83 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 LINC01558Q9Y6Z2 57 aa-2.19□□□□□ -2.76
RNU6-54P-201ENST00000365563 MUC22E2RYF6 1773 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 RPP14O95059 124 aaKnown RBP-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 FAM107AO95990 144 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 TCRAP04437 139 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 RPL7P18124 248 aaKnown RBP-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 UBA52P62987 128 aaKnown RBP-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 SPTSSBQ8NFR3 76 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 CCDC42Q96M95 316 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 DISP2A7MBM2 1401 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 A2MP01023 1474 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 ABCC10Q5T3U5 1492 aa-2.2□□□□□ -2.76
RNU6-54P-201ENST00000365563 DAPK1P53355 1430 aa-2.21□□□□□ -2.76
RNU6-54P-201ENST00000365563 AQP10Q96PS8 301 aa-2.21□□□□□ -2.76
RNU6-54P-201ENST00000365563 DNAJC15Q9Y5T4 150 aa-2.21□□□□□ -2.76
RNU6-54P-201ENST00000365563 MYH8P13535 1937 aa-2.21□□□□□ -2.76
RNU6-54P-201ENST00000365563 A0A0G2JMZ2 1700 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 CLIP1P30622 1438 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 RGPD2P0DJD1 1756 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 IGLC7A0M8Q6 106 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 SIX6O95475 246 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 TPM1P09493 284 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 CBLN1P23435 193 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 PRLHP81277 87 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 C10orf128Q5T292 105 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 FAM167A-AS1Q96KT0 104 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 COPZ2Q9P299 210 aa-2.22□□□□□ -2.76
RNU6-54P-201ENST00000365563 HSBP1L1C9JCN9 74 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 SMIM24O75264 130 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 ATG12O94817 140 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 DYDC1Q8WWB3 177 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 PRO1933Q9H354 126 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 FAIMQ9NVQ4 179 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 ARMC1Q9NVT9 282 aa-2.23□□□□□ -2.77
RNU6-54P-201ENST00000365563 NCOA3Q9Y6Q9 1424 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 HCG22E2RYF7 251 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 NIPSNAP2O75323 286 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 SFT2D2O95562 160 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 HLA-DRB4P13762 266 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 HIST1H1DP16402 221 aaKnown RBP-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 SEC11AP67812 179 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 CLLU1Q5K131 121 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 NKIRAS1Q9NYS0 192 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 V9GYQ6 96 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 HLA-DRB4X5D2U9 266 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 BRCA2P51587 3418 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 SCN11AQ9UI33 1791 aa-2.24□□□□□ -2.77
RNU6-54P-201ENST00000365563 MYH2Q9UKX2 1941 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 PBRM1Q86U86 1689 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 QRICH2Q9H0J4 1663 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 C4AP0C0L4 1744 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 C4BP0C0L5 1744 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 TMEM238C9JI98 176 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 E7EQ34 232 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 CEBPGP53567 150 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 RRAS2P62070 204 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 WHAMMP3Q1A5X7 153 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 PPP1R2P3Q6NXS1 205 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 CTAGE3PQ8IX95 158 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 FAM24BQ8N5W8 94 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 OR13C6PQ8NH95 151 aa-2.25□□□□□ -2.77
RNU6-54P-201ENST00000365563 SMARCA2P51531 1590 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 LOC285095A0A1B0GVY8 99 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 TPM2P07951 284 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 TTC9CQ8N5M4 171 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 CALML5Q9NZT1 146 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 MED31Q9Y3C7 131 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 DOCK2Q92608 1830 aa-2.26□□□□□ -2.77
RNU6-54P-201ENST00000365563 MYH6P13533 1939 aa-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 PRDM15P57071 1507 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 RIMS1Q86UR5 1692 aaKnown RBP-2.27□□□□□ -2.77
RNU6-54P-201ENST00000365563 NWD2Q9ULI1 1742 aa-2.27□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms