RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 STX12Q86Y82 276 aa-3.02□□□□□ -2.89
RNU6-238P-201ENST00000363313 PRAP1Q96NZ9 151 aa-3.02□□□□□ -2.89
RNU6-238P-201ENST00000363313 LINC01558Q9Y6Z2 57 aa-3.02□□□□□ -2.89
RNU6-238P-201ENST00000363313 MYH13Q9UKX3 1938 aa-3.02□□□□□ -2.89
RNU6-238P-201ENST00000363313 CAMSAP1Q5T5Y3 1602 aa-3.03□□□□□ -2.89
RNU6-238P-201ENST00000363313 MRPL34Q9BQ48 92 aaKnown RBP-3.03□□□□□ -2.89
RNU6-238P-201ENST00000363313 GINS3Q9BRX5 216 aa-3.03□□□□□ -2.89
RNU6-238P-201ENST00000363313 MED31Q9Y3C7 131 aa-3.03□□□□□ -2.89
RNU6-238P-201ENST00000363313 NCOA3Q9Y6Q9 1424 aa-3.03□□□□□ -2.89
RNU6-238P-201ENST00000363313 ERCC6Q03468 1493 aa-3.03□□□□□ -2.9
RNU6-238P-201ENST00000363313 A0A087WVE0 104 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 SMIM23A6NLE4 172 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 CCL22O00626 93 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 FGF7P21781 194 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 B2MP61769 119 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 CCL7P80098 99 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 LINC01600Q96MT4 127 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 HIGD1BQ9P298 99 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 DAPK1P53355 1430 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 WDFY4Q6ZS81 3184 aa-3.04□□□□□ -2.9
RNU6-238P-201ENST00000363313 MYH6P13533 1939 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 CEP350Q5VT06 3117 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 IGLC7A0M8Q6 106 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 E7EQ34 232 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 SIX6O95475 246 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 HLA-DRB4P13762 266 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 CLLU1Q5K131 121 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 DYDC1Q8WWB3 177 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 LSM2Q9Y333 95 aaKnown RBP-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 ATP6V1DQ9Y5K8 247 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 HLA-DRB4X5D2U9 266 aa-3.05□□□□□ -2.9
RNU6-238P-201ENST00000363313 CBLN1P23435 193 aa-3.06□□□□□ -2.9
RNU6-238P-201ENST00000363313 FAM24BQ8N5W8 94 aa-3.06□□□□□ -2.9
RNU6-238P-201ENST00000363313 FDCSPQ8NFU4 85 aa-3.06□□□□□ -2.9
RNU6-238P-201ENST00000363313 OR13C6PQ8NH95 151 aa-3.06□□□□□ -2.9
RNU6-238P-201ENST00000363313 SPRR4Q96PI1 79 aa-3.06□□□□□ -2.9
RNU6-238P-201ENST00000363313 ARHGEF10O15013 1369 aa-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 SPAARA0A1B0GVQ0 90 aa-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 C10orf128Q5T292 105 aa-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 TRAPPC2LQ9UL33 140 aa-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 LOC400499M0QZD8 3231 aa-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 XRN1Q8IZH2 1706 aaKnown RBP-3.07□□□□□ -2.9
RNU6-238P-201ENST00000363313 ALKQ9UM73 1620 aa-3.08□□□□□ -2.9
RNU6-238P-201ENST00000363313 CEBPGP53567 150 aa-3.08□□□□□ -2.9
RNU6-238P-201ENST00000363313 NIPSNAP2O75323 286 aa-3.09□□□□□ -2.9
RNU6-238P-201ENST00000363313 IFNA1P01562 189 aa-3.09□□□□□ -2.9
RNU6-238P-201ENST00000363313 MGPP08493 103 aa-3.09□□□□□ -2.9
RNU6-238P-201ENST00000363313 Q6ZUT4 128 aa-3.09□□□□□ -2.9
RNU6-238P-201ENST00000363313 ARL2BPQ9Y2Y0 163 aa-3.09□□□□□ -2.9
RNU6-238P-201ENST00000363313 H7BZZ5 65 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 SFT2D2O95562 160 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 POLR2HP52434 150 aaKnown RBP-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 MIC13Q5XKP0 118 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 KRTAP8-1Q8IUC2 63 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 LCN9Q8WX39 176 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 FAM167A-AS1Q96KT0 104 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 ATP6V1G3Q96LB4 118 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 KIAA1551Q9HCM1 1747 aa-3.1□□□□□ -2.91
RNU6-238P-201ENST00000363313 HCG22E2RYF7 251 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 SMIM24O75264 130 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 FAM107AO95990 144 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 AQP10Q96PS8 301 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 BANF2Q9H503 90 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 C1orf167Q5SNV9 1468 aa-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 PRG4Q92954 1404 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-238P-201ENST00000363313 VPS13CQ709C8 3753 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 ANKRD36A6QL64 1941 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 LOC100130705A0A1B0GUX0 176 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 UBA52P62987 128 aaKnown RBP-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 GNG3P63215 75 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 S100A7L2Q5SY68 101 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 CLPSL2Q6UWE3 100 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 SMIM20Q8N5G0 67 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 TTC9CQ8N5M4 171 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 CCDC115Q96NT0 180 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 CCDC32Q9BV29 185 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 CALML5Q9NZT1 146 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 IFT140Q96RY7 1462 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 RGPD2P0DJD1 1756 aa-3.12□□□□□ -2.91
RNU6-238P-201ENST00000363313 ARAP2Q8WZ64 1704 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 TRBV20-1A0A075B6N2 111 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 PPP1R2P3Q6NXS1 205 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 DHRS4L2Q6PKH6 230 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 THEM6Q8WUY1 208 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 CFAP53Q96M91 514 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 LLPHQ9BRT6 129 aaKnown RBP-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 SEC11CQ9BY50 192 aa-3.13□□□□□ -2.91
RNU6-238P-201ENST00000363313 PSME4Q14997 1843 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 MBD5Q9P267 1494 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 SEC11AP67812 179 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 PRLHP81277 87 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 PPIP5K1Q6PFW1 1433 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 CDC42BPGQ6DT37 1551 aa-3.14□□□□□ -2.91
RNU6-238P-201ENST00000363313 CLIP1P30622 1438 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 TRAV13-2A0A0B4J235 113 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 HMGN4O00479 90 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 MT-ND4LP03901 98 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 IL5P05113 134 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 TPM3P06753 285 aa-3.15□□□□□ -2.91
RNU6-238P-201ENST00000363313 PAEPP09466 180 aa-3.15□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms