RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 COX6A2Q02221 97 aa10.56□□□□□ -0.72
SLC6A20-202ENST00000358525 PLA2G2AP14555 144 aa10.56□□□□□ -0.72
SLC6A20-202ENST00000358525 SPTBN4Q9H254 2564 aa10.56□□□□□ -0.72
SLC6A20-202ENST00000358525 IGKV2-24A0A0C4DH68 120 aa10.55□□□□□ -0.72
SLC6A20-202ENST00000358525 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
SLC6A20-202ENST00000358525 IGLV1-51P01701 117 aa10.54□□□□□ -0.72
SLC6A20-202ENST00000358525 UBE2AP49459 152 aa10.54□□□□□ -0.72
SLC6A20-202ENST00000358525 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
SLC6A20-202ENST00000358525 SMIM1B2RUZ4 78 aa10.54□□□□□ -0.72
SLC6A20-202ENST00000358525 PKIGQ9Y2B9 76 aa10.54□□□□□ -0.72
SLC6A20-202ENST00000358525 PDE6GP18545 87 aa10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 AMELXQ99217 191 aa10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 TRAV23DV6A0A075B6W5 121 aa10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 PRRC2CQ9Y520 2896 aaKnown RBP10.53□□□□□ -0.72
SLC6A20-202ENST00000358525 SPATA25Q9BR10 227 aa10.52□□□□□ -0.72
SLC6A20-202ENST00000358525 NDUFS5O43920 106 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 ADAMTSL4-AS1Q5T5F5 129 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 LELP1Q5T871 98 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 PTPRBP23467 1997 aa10.52□□□□□ -0.73
SLC6A20-202ENST00000358525 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
SLC6A20-202ENST00000358525 XGP55808 180 aa10.51□□□□□ -0.73
SLC6A20-202ENST00000358525 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
SLC6A20-202ENST00000358525 ABCA12Q86UK0 2595 aa10.5□□□□□ -0.73
SLC6A20-202ENST00000358525 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
SLC6A20-202ENST00000358525 SHISA2Q6UWI4 295 aa10.49□□□□□ -0.73
SLC6A20-202ENST00000358525 LINC01546A6NGU7 62 aa10.49□□□□□ -0.73
SLC6A20-202ENST00000358525 SYCNQ0VAF6 134 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 Q8IZM0 81 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 FHL2Q14192 279 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 KLK5Q9Y337 293 aaPredicted RBP10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 OXLD1Q5BKU9 147 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 COL27A1Q8IZC6 1860 aaPredicted RBP10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 SETD2Q9BYW2 2564 aaPredicted RBP10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
SLC6A20-202ENST00000358525 ENHOQ6UWT2 76 aa10.47□□□□□ -0.73
SLC6A20-202ENST00000358525 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
SLC6A20-202ENST00000358525 FAM19A4Q96LR4 140 aa10.47□□□□□ -0.73
SLC6A20-202ENST00000358525 CHD9Q3L8U1 2897 aa10.46□□□□□ -0.73
SLC6A20-202ENST00000358525 C16orf95Q9H693 158 aa10.46□□□□□ -0.73
SLC6A20-202ENST00000358525 FAM19A5Q7Z5A7 132 aaPredicted RBP10.46□□□□□ -0.74
SLC6A20-202ENST00000358525 LINC00315P59091 139 aa10.46□□□□□ -0.74
SLC6A20-202ENST00000358525 Q6ZQY7 126 aa10.46□□□□□ -0.74
SLC6A20-202ENST00000358525 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
SLC6A20-202ENST00000358525 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
SLC6A20-202ENST00000358525 BPY2O14599 106 aa10.45□□□□□ -0.74
SLC6A20-202ENST00000358525 CSDC2Q9Y534 153 aaKnown RBP10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 A0A087WZ39 114 aa10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 COX17Q14061 63 aa10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 CYSRT1A8MQ03 144 aa10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 J3KT08 172 aa10.44□□□□□ -0.74
SLC6A20-202ENST00000358525 TMEM258P61165 79 aa10.43□□□□□ -0.74
SLC6A20-202ENST00000358525 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
SLC6A20-202ENST00000358525 NDUFB1O75438 58 aa10.43□□□□□ -0.74
SLC6A20-202ENST00000358525 NANOS2P60321 138 aaKnown RBP10.43□□□□□ -0.74
SLC6A20-202ENST00000358525 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
SLC6A20-202ENST00000358525 UQCRQO14949 82 aa10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 RETNQ9HD89 108 aa10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 C11orf72Q8NBR9 251 aa10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 C14orf177Q52M58 125 aa10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 MKI67P46013 3256 aaKnown RBP10.42□□□□□ -0.74
SLC6A20-202ENST00000358525 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 MP68P56378 58 aa10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 ATP5EP2Q5VTU8 51 aa10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 AGRNO00468 2067 aa10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 JMJD1CQ15652 2540 aa10.41□□□□□ -0.74
SLC6A20-202ENST00000358525 M0R378 163 aa10.4□□□□□ -0.74
SLC6A20-202ENST00000358525 PRR3P79522 188 aaKnown RBP10.4□□□□□ -0.74
SLC6A20-202ENST00000358525 C20orf197Q8N268 126 aa10.4□□□□□ -0.74
SLC6A20-202ENST00000358525 Q8N2B8 174 aa10.4□□□□□ -0.74
SLC6A20-202ENST00000358525 B9D2Q9BPU9 175 aa10.4□□□□□ -0.74
SLC6A20-202ENST00000358525 ZNF462Q96JM2 2506 aa10.4□□□□□ -0.75
SLC6A20-202ENST00000358525 A0A096LNI7 61 aa10.39□□□□□ -0.75
SLC6A20-202ENST00000358525 CCKP06307 115 aa10.39□□□□□ -0.75
SLC6A20-202ENST00000358525 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
SLC6A20-202ENST00000358525 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
SLC6A20-202ENST00000358525 A0A087WYN8 130 aa10.38□□□□□ -0.75
SLC6A20-202ENST00000358525 ZNF73O43830 326 aaPredicted RBP10.38□□□□□ -0.75
SLC6A20-202ENST00000358525 FN1P02751 2386 aaKnown RBP10.38□□□□□ -0.75
SLC6A20-202ENST00000358525 C3orf84H3BNL1 204 aa10.37□□□□□ -0.75
SLC6A20-202ENST00000358525 H0Y9J4 135 aa10.37□□□□□ -0.75
SLC6A20-202ENST00000358525 BRCA2P51587 3418 aa10.37□□□□□ -0.75
SLC6A20-202ENST00000358525 WFDC9Q8NEX5 89 aa10.37□□□□□ -0.75
SLC6A20-202ENST00000358525 POLQO75417 2590 aa10.37□□□□□ -0.75
SLC6A20-202ENST00000358525 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
SLC6A20-202ENST00000358525 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
SLC6A20-202ENST00000358525 CCDC179H3BU77 68 aa10.36□□□□□ -0.75
SLC6A20-202ENST00000358525 Q9UF83 564 aa10.35□□□□□ -0.75
SLC6A20-202ENST00000358525 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
SLC6A20-202ENST00000358525 LAMA3Q16787 3333 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms