RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 Q8N9L7 120 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 RBX1P62877 108 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 C10orf25Q5T742 122 aa7.37□□□□□ -1.23
COL11A1-201ENST00000353414 CUL9Q8IWT3 2517 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 KRTAP10-9P60411 292 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 NAV3Q8IVL0 2385 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 PSPHP1O15172 72 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 TRIAP1O43715 76 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 ZNF706Q9Y5V0 76 aaPredicted RBP7.36□□□□□ -1.23
COL11A1-201ENST00000353414 ODF3BA8MYP8 253 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 CRIP2P52943 208 aaPredicted RBP7.36□□□□□ -1.23
COL11A1-201ENST00000353414 CDSNQ15517 529 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 Q6ZQY7 126 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 C6orf223Q8N319 242 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 MAPKAPK5-AS1Q8N8E1 139 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
COL11A1-201ENST00000353414 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
COL11A1-201ENST00000353414 MRPS12O15235 138 aaKnown RBP7.35□□□□□ -1.23
COL11A1-201ENST00000353414 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
COL11A1-201ENST00000353414 BEAN1Q3B7T3 259 aa7.35□□□□□ -1.23
COL11A1-201ENST00000353414 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
COL11A1-201ENST00000353414 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
COL11A1-201ENST00000353414 SBSPONQ8IVN8 264 aa7.34□□□□□ -1.23
COL11A1-201ENST00000353414 CRIP1P50238 77 aa7.34□□□□□ -1.23
COL11A1-201ENST00000353414 ZNF22P17026 224 aaPredicted RBP7.33□□□□□ -1.24
COL11A1-201ENST00000353414 PDE6GP18545 87 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 XGP55808 180 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 M0QY20 66 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 LRP4O75096 1905 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 C19orf71A6NCJ1 209 aa7.33□□□□□ -1.24
COL11A1-201ENST00000353414 ABCA2Q9BZC7 2435 aa7.32□□□□□ -1.24
COL11A1-201ENST00000353414 M0R378 163 aa7.32□□□□□ -1.24
COL11A1-201ENST00000353414 PRR9Q5T870 116 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 SPRY4Q9C004 299 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 LELP1Q5T871 98 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 FSHBP01225 129 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 Q6ZTC4 211 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 EBI3Q14213 229 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 Q6ZSR3 168 aa7.31□□□□□ -1.24
COL11A1-201ENST00000353414 BDP1A6H8Y1 2624 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 CYSRT1A8MQ03 144 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 IBA57-AS1B1ANH7 110 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 TRBV7-6A0A0J9YX20 115 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 CD164L2Q6UWJ8 174 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 MBD6Q96DN6 1003 aa7.3□□□□□ -1.24
COL11A1-201ENST00000353414 REG3GQ6UW15 175 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 TRBV6-4A0A1B0GX49 114 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 GAS8-AS1O95177 125 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 H7C423 109 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 U3KQK5 164 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 DNAH12Q6ZR08 3092 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 CPAMD8Q8IZJ3 1885 aa7.29□□□□□ -1.24
COL11A1-201ENST00000353414 TSHBP01222 138 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 CRYGAP11844 174 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 C1orf134Q5TEV5 83 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 DHRS4-AS1Q9P1J3 65 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 AVPP01185 164 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 COX6A2Q02221 97 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 RNF185Q96GF1 192 aa7.28□□□□□ -1.24
COL11A1-201ENST00000353414 C11orf71Q6IPW1 123 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 Q9UF83 564 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
COL11A1-201ENST00000353414 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 A8MTW9 85 aa7.27□□□□□ -1.25
COL11A1-201ENST00000353414 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
COL11A1-201ENST00000353414 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
COL11A1-201ENST00000353414 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
COL11A1-201ENST00000353414 PRLHP81277 87 aa7.26□□□□□ -1.25
COL11A1-201ENST00000353414 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
COL11A1-201ENST00000353414 RNASE3P12724 160 aaKnown RBP7.25□□□□□ -1.25
COL11A1-201ENST00000353414 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
COL11A1-201ENST00000353414 LINC01547P58512 204 aaPredicted RBP7.25□□□□□ -1.25
COL11A1-201ENST00000353414 BRWD1-AS2P59051 145 aa7.25□□□□□ -1.25
COL11A1-201ENST00000353414 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 NDUFC1O43677 76 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 Q9BRP9 147 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 PTPRBP23467 1997 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 A0A1B0GXF2 115 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 Q6ZPA2 131 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 LST1O00453 97 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 MRGPRG-AS1Q2M3A8 158 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 SPACA4Q8TDM5 124 aa7.24□□□□□ -1.25
COL11A1-201ENST00000353414 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
COL11A1-201ENST00000353414 C2orf48Q96LS8 159 aa7.23□□□□□ -1.25
COL11A1-201ENST00000353414 WDR87Q6ZQQ6 2873 aa7.23□□□□□ -1.25
COL11A1-201ENST00000353414 IGLV4-60A0A075B6I1 120 aa7.23□□□□□ -1.25
COL11A1-201ENST00000353414 TRBV10-3A0A0K0K1G6 114 aa7.23□□□□□ -1.25
COL11A1-201ENST00000353414 COX7CP15954 63 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms