RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 COX6A2Q02221 97 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 LYRM7Q5U5X0 104 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 CHCHD7Q9BUK0 85 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 C9JAW5 83 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 LEPROTO15243 131 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 APOC4P55056 127 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 SPANXA1Q9NS26 97 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 RPL32P62910 135 aaKnown RBP7.43□□□□□ -1.22
SMPD4-201ENST00000351288 PKD1L1Q8TDX9 2849 aa7.43□□□□□ -1.22
SMPD4-201ENST00000351288 RS1O15537 224 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 UBE2D4Q9Y2X8 147 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 FBN1P35555 2871 aaKnown RBP7.42□□□□□ -1.22
SMPD4-201ENST00000351288 FHL3Q13643 280 aa7.42□□□□□ -1.22
SMPD4-201ENST00000351288 CKS1BP61024 79 aa7.41□□□□□ -1.22
SMPD4-201ENST00000351288 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
SMPD4-201ENST00000351288 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
SMPD4-201ENST00000351288 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
SMPD4-201ENST00000351288 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
SMPD4-201ENST00000351288 UBE2WQ96B02 151 aa7.4□□□□□ -1.22
SMPD4-201ENST00000351288 DNAJC30Q96LL9 226 aa7.4□□□□□ -1.22
SMPD4-201ENST00000351288 HERVK_113P63121 156 aa7.4□□□□□ -1.22
SMPD4-201ENST00000351288 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.23
SMPD4-201ENST00000351288 FOXI1Q12951 378 aa7.4□□□□□ -1.23
SMPD4-201ENST00000351288 CLEC2BQ92478 149 aa7.4□□□□□ -1.23
SMPD4-201ENST00000351288 SIGMAR1Q99720 223 aa7.4□□□□□ -1.23
SMPD4-201ENST00000351288 Q9HAA7 133 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 IGHV4-30-4P0DP06 118 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 UBE2D3P61077 147 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 UBE2D2P62837 147 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 SS18Q15532 418 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 ANKRD29Q8N6D5 301 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 CRPP02741 224 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 RPL13AP40429 203 aaKnown RBP7.39□□□□□ -1.23
SMPD4-201ENST00000351288 CARD19Q96LW7 228 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 C16orf95Q9H693 158 aa7.39□□□□□ -1.23
SMPD4-201ENST00000351288 IGLV4-60A0A075B6I1 120 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 ATP5G1P05496 136 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 LINC00269Q8N2A0 174 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 PRO0255Q9UI72 69 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 KMT2BQ9UMN6 2715 aaPredicted RBP7.38□□□□□ -1.23
SMPD4-201ENST00000351288 SPART-AS1P0CW21 52 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 MRPS36P82909 103 aaKnown RBP7.38□□□□□ -1.23
SMPD4-201ENST00000351288 PIK3CD-AS1Q5SR53 167 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
SMPD4-201ENST00000351288 TRIAP1O43715 76 aa7.37□□□□□ -1.23
SMPD4-201ENST00000351288 SLC25A20O43772 301 aa7.37□□□□□ -1.23
SMPD4-201ENST00000351288 MT-ATP8P03928 68 aa7.37□□□□□ -1.23
SMPD4-201ENST00000351288 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
SMPD4-201ENST00000351288 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.36□□□□□ -1.23
SMPD4-201ENST00000351288 LITAFQ99732 161 aa7.36□□□□□ -1.23
SMPD4-201ENST00000351288 Q8N3U1 123 aa7.36□□□□□ -1.23
SMPD4-201ENST00000351288 NTN5Q8WTR8 489 aaPredicted RBP7.36□□□□□ -1.23
SMPD4-201ENST00000351288 TEX49A0A1B0GTD5 131 aa7.35□□□□□ -1.23
SMPD4-201ENST00000351288 LINC00242Q5T6M2 205 aa7.35□□□□□ -1.23
SMPD4-201ENST00000351288 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
SMPD4-201ENST00000351288 MIR7-3HGQ8N6C7 128 aa7.35□□□□□ -1.23
SMPD4-201ENST00000351288 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
SMPD4-201ENST00000351288 GIG44P09565 113 aaPredicted RBP7.34□□□□□ -1.23
SMPD4-201ENST00000351288 FHL2Q14192 279 aa7.34□□□□□ -1.23
SMPD4-201ENST00000351288 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
SMPD4-201ENST00000351288 TINCRA0A1B0GVN0 87 aa7.34□□□□□ -1.23
SMPD4-201ENST00000351288 DNAL4O96015 105 aa7.34□□□□□ -1.23
SMPD4-201ENST00000351288 XGP55808 180 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 TRBV6-4A0A1B0GX49 114 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 CDC42SE2Q9NRR3 84 aa7.33□□□□□ -1.24
SMPD4-201ENST00000351288 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
SMPD4-201ENST00000351288 MRPL23Q16540 153 aaKnown RBP7.32□□□□□ -1.24
SMPD4-201ENST00000351288 ICOSQ9Y6W8 199 aa7.32□□□□□ -1.24
SMPD4-201ENST00000351288 A8MTW9 85 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 MIAQ16674 131 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 PPDPFLQ8WWR9 84 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 TRBV20-1A0A075B6N2 111 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 IGKV2D-24A0A075B6R9 120 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
SMPD4-201ENST00000351288 KRTAP24-1Q3LI83 254 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 ZFAND6Q6FIF0 208 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 SND1-IT1Q9HBX3 110 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 C19orf73Q9NVV2 129 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 A0A0B4J2C4 111 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 NANOS2P60321 138 aaKnown RBP7.3□□□□□ -1.24
SMPD4-201ENST00000351288 S100A7L2Q5SY68 101 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 SPATA25Q9BR10 227 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 EDA2RQ9HAV5 297 aa7.3□□□□□ -1.24
SMPD4-201ENST00000351288 CRYBA4P53673 196 aa7.29□□□□□ -1.24
SMPD4-201ENST00000351288 REG3AQ06141 175 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms