RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
TRIM4-201ENST00000349062 CLEC2BQ92478 149 aa9.94□□□□□ -0.82
TRIM4-201ENST00000349062 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
TRIM4-201ENST00000349062 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
TRIM4-201ENST00000349062 K7EQD1 137 aa9.93□□□□□ -0.82
TRIM4-201ENST00000349062 RS1O15537 224 aa9.93□□□□□ -0.82
TRIM4-201ENST00000349062 ATXN8Q156A1 80 aa9.93□□□□□ -0.82
TRIM4-201ENST00000349062 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
TRIM4-201ENST00000349062 TOMM7Q9P0U1 55 aa9.93□□□□□ -0.82
TRIM4-201ENST00000349062 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
TRIM4-201ENST00000349062 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
TRIM4-201ENST00000349062 IFITM1P13164 125 aa9.92□□□□□ -0.82
TRIM4-201ENST00000349062 NDUFV3P56181 108 aaKnown RBP9.92□□□□□ -0.82
TRIM4-201ENST00000349062 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
TRIM4-201ENST00000349062 BAHCC1Q9P281 2608 aa9.91□□□□□ -0.82
TRIM4-201ENST00000349062 TRIAP1O43715 76 aa9.91□□□□□ -0.82
TRIM4-201ENST00000349062 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
TRIM4-201ENST00000349062 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
TRIM4-201ENST00000349062 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
TRIM4-201ENST00000349062 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
TRIM4-201ENST00000349062 A8MTW9 85 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 COX6A2Q02221 97 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 SVIPQ8NHG7 77 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
TRIM4-201ENST00000349062 LEPROTO15243 131 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 COX6CP09669 75 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 MGAM2Q2M2H8 2515 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
TRIM4-201ENST00000349062 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
TRIM4-201ENST00000349062 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
TRIM4-201ENST00000349062 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
TRIM4-201ENST00000349062 AMELXQ99217 191 aa9.88□□□□□ -0.83
TRIM4-201ENST00000349062 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
TRIM4-201ENST00000349062 FAM104AQ969W3 186 aa9.87□□□□□ -0.83
TRIM4-201ENST00000349062 HERV-K104P63124 156 aa9.87□□□□□ -0.83
TRIM4-201ENST00000349062 MEIG1Q5JSS6 88 aa9.86□□□□□ -0.83
TRIM4-201ENST00000349062 GYPEP15421 78 aa9.86□□□□□ -0.83
TRIM4-201ENST00000349062 PLAC8L1A1L4L8 177 aa9.86□□□□□ -0.83
TRIM4-201ENST00000349062 FAM222AQ5U5X8 452 aa9.86□□□□□ -0.83
TRIM4-201ENST00000349062 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
TRIM4-201ENST00000349062 TMEM243Q9BU79 118 aa9.85□□□□□ -0.83
TRIM4-201ENST00000349062 CITED1Q99966 193 aa9.85□□□□□ -0.83
TRIM4-201ENST00000349062 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
TRIM4-201ENST00000349062 SBSPONQ8IVN8 264 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 TMEM101Q96IK0 257 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 CMC4P56277 68 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-201ENST00000349062 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
TRIM4-201ENST00000349062 H7C423 109 aa9.83□□□□□ -0.84
TRIM4-201ENST00000349062 FAM110AQ9BQ89 295 aa9.83□□□□□ -0.84
TRIM4-201ENST00000349062 Q9H8V8 135 aa9.83□□□□□ -0.84
TRIM4-201ENST00000349062 A0A0B4J2C4 111 aa9.83□□□□□ -0.84
TRIM4-201ENST00000349062 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
TRIM4-201ENST00000349062 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
TRIM4-201ENST00000349062 PRB2P02812 416 aaPredicted RBP9.82□□□□□ -0.84
TRIM4-201ENST00000349062 C9orf66Q5T8R8 295 aa9.82□□□□□ -0.84
TRIM4-201ENST00000349062 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 F5H768 121 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
TRIM4-201ENST00000349062 DAZ2Q13117 558 aaKnown RBP9.81□□□□□ -0.84
TRIM4-201ENST00000349062 Q8N3U1 123 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 PYGO1Q9Y3Y4 419 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 FHL2Q14192 279 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 LINC00242Q5T6M2 205 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 SHISA2Q6UWI4 295 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 PRIMA1Q86XR5 153 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 VSIG2Q96IQ7 327 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
TRIM4-201ENST00000349062 RETNQ9HD89 108 aa9.81□□□□□ -0.84
TRIM4-201ENST00000349062 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
TRIM4-201ENST00000349062 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
TRIM4-201ENST00000349062 XCL1P47992 114 aa9.8□□□□□ -0.84
TRIM4-201ENST00000349062 PAX4O43316 350 aa9.79□□□□□ -0.84
TRIM4-201ENST00000349062 TRBV10-1A0A0K0K1A3 114 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 DAD1P61803 113 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 IGHV4-28A0A0C4DH34 117 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 FAM236AA0A1B0GUQ0 79 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 FAM236BA0A1B0GV22 79 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 IL17DQ8TAD2 202 aa9.78□□□□□ -0.84
TRIM4-201ENST00000349062 PFN2P35080 140 aa9.77□□□□□ -0.84
TRIM4-201ENST00000349062 CELA1Q9UNI1 258 aa9.77□□□□□ -0.84
TRIM4-201ENST00000349062 X6R8D5 127 aa9.77□□□□□ -0.84
TRIM4-201ENST00000349062 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
TRIM4-201ENST00000349062 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
TRIM4-201ENST00000349062 IGHV4-30-4P0DP06 118 aa9.76□□□□□ -0.85
TRIM4-201ENST00000349062 TRBV6-8A0A0A6YYG3 113 aa9.75□□□□□ -0.85
TRIM4-201ENST00000349062 HERVK_113P63121 156 aa9.75□□□□□ -0.85
TRIM4-201ENST00000349062 TRBV6-4A0A1B0GX49 114 aa9.75□□□□□ -0.85
TRIM4-201ENST00000349062 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
TRIM4-201ENST00000349062 MIAQ16674 131 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms