RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 FAM19A5Q7Z5A7 132 aaPredicted RBP15.41■□□□□ 0.06
TRIM3-201ENST00000345851 IGHV3OR16-12A0A075B7B8 117 aa15.41■□□□□ 0.06
TRIM3-201ENST00000345851 CYSTM1Q9H1C7 97 aa15.4■□□□□ 0.06
TRIM3-201ENST00000345851 J3KT08 172 aa15.4■□□□□ 0.06
TRIM3-201ENST00000345851 KRTAP1-3Q8IUG1 177 aa15.4■□□□□ 0.06
TRIM3-201ENST00000345851 C2orf48Q96LS8 159 aa15.4■□□□□ 0.06
TRIM3-201ENST00000345851 PDZD2O15018 2839 aa15.39■□□□□ 0.05
TRIM3-201ENST00000345851 ATP5G1P05496 136 aa15.38■□□□□ 0.05
TRIM3-201ENST00000345851 LINC00242Q5T6M2 205 aa15.38■□□□□ 0.05
TRIM3-201ENST00000345851 IGLV5-45A0A087WSX0 123 aa15.38■□□□□ 0.05
TRIM3-201ENST00000345851 CXCL5P42830 114 aa15.38■□□□□ 0.05
TRIM3-201ENST00000345851 UNC79Q9P2D8 2635 aa15.38■□□□□ 0.05
TRIM3-201ENST00000345851 AKAP9Q99996 3911 aa15.37■□□□□ 0.05
TRIM3-201ENST00000345851 IGKV3D-7A0A0C4DH55 119 aa15.37■□□□□ 0.05
TRIM3-201ENST00000345851 INAFM2P0DMQ5 153 aa15.37■□□□□ 0.05
TRIM3-201ENST00000345851 NOTCH3Q9UM47 2321 aa15.37■□□□□ 0.05
TRIM3-201ENST00000345851 IGLV5-39A0A0G2JS06 123 aa15.36■□□□□ 0.05
TRIM3-201ENST00000345851 SMIM1B2RUZ4 78 aa15.36■□□□□ 0.05
TRIM3-201ENST00000345851 PLA2G2AP14555 144 aa15.36■□□□□ 0.05
TRIM3-201ENST00000345851 MALP21145 153 aa15.35■□□□□ 0.05
TRIM3-201ENST00000345851 C9orf129Q5T035 196 aaKnown RBP15.35■□□□□ 0.05
TRIM3-201ENST00000345851 LRRC75A-AS1Q8N1F1 130 aa15.35■□□□□ 0.05
TRIM3-201ENST00000345851 CFHR3Q02985 330 aa15.34■□□□□ 0.05
TRIM3-201ENST00000345851 WNK1Q9H4A3 2382 aa15.34■□□□□ 0.05
TRIM3-201ENST00000345851 SMIM9A6NGZ8 99 aa15.34■□□□□ 0.05
TRIM3-201ENST00000345851 C14orf132Q9NPU4 83 aa15.34■□□□□ 0.05
TRIM3-201ENST00000345851 J3QLI3 93 aa15.34■□□□□ 0.05
TRIM3-201ENST00000345851 ATOX1O00244 68 aa15.33■□□□□ 0.04
TRIM3-201ENST00000345851 DNAL4O96015 105 aa15.33■□□□□ 0.04
TRIM3-201ENST00000345851 CRYGAP11844 174 aa15.33■□□□□ 0.04
TRIM3-201ENST00000345851 DEFB131AP59861 70 aa15.33■□□□□ 0.04
TRIM3-201ENST00000345851 A0A087WVE0 104 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 A0A1B0GX51 115 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 PSMB8P28062 276 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 C5orf47Q569G3 176 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 FAM222AQ5U5X8 452 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 COPS9Q8WXC6 57 aa15.32■□□□□ 0.04
TRIM3-201ENST00000345851 J3QKU1 62 aa15.31■□□□□ 0.04
TRIM3-201ENST00000345851 KIR2DL5BQ8NHK3 375 aa15.31■□□□□ 0.04
TRIM3-201ENST00000345851 HIST1H4AP62805 103 aaKnown RBP15.3■□□□□ 0.04
TRIM3-201ENST00000345851 ZNF415Q09FC8 603 aa15.3■□□□□ 0.04
TRIM3-201ENST00000345851 Q6YL49 198 aa15.3■□□□□ 0.04
TRIM3-201ENST00000345851 RBMY1BA6NDE4 496 aaKnown RBP15.3■□□□□ 0.04
TRIM3-201ENST00000345851 RBMY1EA6NEQ0 496 aaKnown RBP15.3■□□□□ 0.04
TRIM3-201ENST00000345851 IGHV3-53P01767 116 aa15.3■□□□□ 0.04
TRIM3-201ENST00000345851 RBMY1DP0C7P1 496 aaKnown RBP15.3■□□□□ 0.04
TRIM3-201ENST00000345851 FSHBP01225 129 aa15.29■□□□□ 0.04
TRIM3-201ENST00000345851 A0A087WYN8 130 aa15.29■□□□□ 0.04
TRIM3-201ENST00000345851 CRPP02741 224 aa15.29■□□□□ 0.04
TRIM3-201ENST00000345851 RPL18AQ02543 176 aaKnown RBP15.28■□□□□ 0.04
TRIM3-201ENST00000345851 LINC00337Q8N6G1 96 aa15.28■□□□□ 0.04
TRIM3-201ENST00000345851 C18orf65Q6ZTR6 163 aa15.27■□□□□ 0.04
TRIM3-201ENST00000345851 ZNF702PQ9H963 129 aa15.26■□□□□ 0.03
TRIM3-201ENST00000345851 LINC00846Q9NV44 126 aa15.26■□□□□ 0.03
TRIM3-201ENST00000345851 DEFB136Q30KP8 78 aa15.26■□□□□ 0.03
TRIM3-201ENST00000345851 RPL28P46779 137 aaKnown RBP15.24■□□□□ 0.03
TRIM3-201ENST00000345851 MIR7-3HGQ8N6C7 128 aa15.24■□□□□ 0.03
TRIM3-201ENST00000345851 DSCR8Q96T75 97 aa15.24■□□□□ 0.03
TRIM3-201ENST00000345851 TRAV13-2A0A0B4J235 113 aa15.23■□□□□ 0.03
TRIM3-201ENST00000345851 TOMM7Q9P0U1 55 aa15.23■□□□□ 0.03
TRIM3-201ENST00000345851 F5H768 121 aa15.23■□□□□ 0.03
TRIM3-201ENST00000345851 SMIM11BQ8TCY0 68 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 SND1-IT1Q9HBX3 110 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 NIPBLQ6KC79 2804 aaeCLIP15.22■□□□□ 0.03
TRIM3-201ENST00000345851 IGKV2-28A0A075B6P5 120 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 IGKV2D-28P01615 120 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 RNF152Q8N8N0 203 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 C11orf44Q8N8P7 122 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 NCR3O14931 201 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 C11orf72Q8NBR9 251 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 OR13C6PQ8NH95 151 aa15.22■□□□□ 0.03
TRIM3-201ENST00000345851 ANK3Q12955 4377 aaKnown RBP15.22■□□□□ 0.03
TRIM3-201ENST00000345851 KHDC1LQ5JSQ8 128 aa15.21■□□□□ 0.02
TRIM3-201ENST00000345851 SLPIP03973 132 aa15.2■□□□□ 0.02
TRIM3-201ENST00000345851 SERP2Q8N6R1 65 aa15.2■□□□□ 0.02
TRIM3-201ENST00000345851 IGKV3OR2-268A0A0C4DH90 116 aa15.19■□□□□ 0.02
TRIM3-201ENST00000345851 LECT2O14960 151 aa15.19■□□□□ 0.02
TRIM3-201ENST00000345851 LINC01561Q8N1V8 128 aa15.19■□□□□ 0.02
TRIM3-201ENST00000345851 DPH3Q96FX2 82 aa15.19■□□□□ 0.02
TRIM3-201ENST00000345851 RPS28P62857 69 aaKnown RBP15.19■□□□□ 0.02
TRIM3-201ENST00000345851 NTM-AS1Q6ZSK4 140 aa15.19■□□□□ 0.02
TRIM3-201ENST00000345851 USP17L23D6RBM5 183 aa15.18■□□□□ 0.02
TRIM3-201ENST00000345851 OXTP01178 125 aa15.18■□□□□ 0.02
TRIM3-201ENST00000345851 Q6JHZ5 121 aa15.18■□□□□ 0.02
TRIM3-201ENST00000345851 TMEM89A2RUT3 159 aa15.17■□□□□ 0.02
TRIM3-201ENST00000345851 LINC00158P58513 81 aa15.17■□□□□ 0.02
TRIM3-201ENST00000345851 PF4P02776 101 aa15.17■□□□□ 0.02
TRIM3-201ENST00000345851 SLURP1P55000 103 aa15.17■□□□□ 0.02
TRIM3-201ENST00000345851 CDC42SE2Q9NRR3 84 aa15.16■□□□□ 0.02
TRIM3-201ENST00000345851 TRGV1A0A0A0MS02 117 aa15.16■□□□□ 0.02
TRIM3-201ENST00000345851 TMEM258P61165 79 aa15.16■□□□□ 0.02
TRIM3-201ENST00000345851 SMR3AQ99954 134 aa15.16■□□□□ 0.02
TRIM3-201ENST00000345851 UPK3BQ9BT76 320 aa15.16■□□□□ 0.02
TRIM3-201ENST00000345851 XCL2Q9UBD3 114 aa15.15■□□□□ 0.02
TRIM3-201ENST00000345851 HIVEP2P31629 2446 aa15.14■□□□□ 0.01
TRIM3-201ENST00000345851 ESM1Q9NQ30 184 aa15.14■□□□□ 0.01
TRIM3-201ENST00000345851 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
TRIM3-201ENST00000345851 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
TRIM3-201ENST00000345851 PFN2P35080 140 aa15.13■□□□□ 0.01
TRIM3-201ENST00000345851 FAM19A3Q7Z5A8 133 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms