RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 DAZ4Q86SG3 579 aaKnown RBP13.58□□□□□ -0.24
LYSMD4-202ENST00000344791 DAZ3Q9NR90 486 aaKnown RBP13.58□□□□□ -0.24
LYSMD4-202ENST00000344791 HECTD1Q9ULT8 2610 aa13.58□□□□□ -0.24
LYSMD4-202ENST00000344791 SOSTDC1Q6X4U4 206 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 H7C423 109 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 DEFB130BP0DP73 79 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 DEFB130AP0DP74 79 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 SMR3AQ99954 134 aa13.57□□□□□ -0.24
LYSMD4-202ENST00000344791 PLAC8L1A1L4L8 177 aa13.56□□□□□ -0.24
LYSMD4-202ENST00000344791 TMEM243Q9BU79 118 aa13.56□□□□□ -0.24
LYSMD4-202ENST00000344791 TRBV10-1A0A0K0K1A3 114 aa13.56□□□□□ -0.24
LYSMD4-202ENST00000344791 A0A1B0GV72 72 aa13.55□□□□□ -0.24
LYSMD4-202ENST00000344791 IGLV5-39A0A0G2JS06 123 aa13.55□□□□□ -0.24
LYSMD4-202ENST00000344791 UBE2WQ96B02 151 aa13.54□□□□□ -0.24
LYSMD4-202ENST00000344791 CRLF1O75462 422 aa13.54□□□□□ -0.24
LYSMD4-202ENST00000344791 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
LYSMD4-202ENST00000344791 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
LYSMD4-202ENST00000344791 C11orf68Q9H3H3 251 aaKnown RBP13.53□□□□□ -0.24
LYSMD4-202ENST00000344791 IGLV4-60A0A075B6I1 120 aa13.53□□□□□ -0.24
LYSMD4-202ENST00000344791 IFITM1P13164 125 aa13.53□□□□□ -0.24
LYSMD4-202ENST00000344791 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
LYSMD4-202ENST00000344791 A0A096LPF7 62 aa13.52□□□□□ -0.24
LYSMD4-202ENST00000344791 KRTAP1-1Q07627 177 aa13.52□□□□□ -0.24
LYSMD4-202ENST00000344791 F5H768 121 aa13.51□□□□□ -0.25
LYSMD4-202ENST00000344791 TIMM17BO60830 172 aa13.51□□□□□ -0.25
LYSMD4-202ENST00000344791 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
LYSMD4-202ENST00000344791 C19orf73Q9NVV2 129 aa13.51□□□□□ -0.25
LYSMD4-202ENST00000344791 TRAV8-4A0A0B4J246 113 aa13.5□□□□□ -0.25
LYSMD4-202ENST00000344791 LST1O00453 97 aa13.5□□□□□ -0.25
LYSMD4-202ENST00000344791 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
LYSMD4-202ENST00000344791 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
LYSMD4-202ENST00000344791 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
LYSMD4-202ENST00000344791 C5orf38Q86SI9 138 aa13.49□□□□□ -0.25
LYSMD4-202ENST00000344791 CSDC2Q9Y534 153 aaKnown RBP13.49□□□□□ -0.25
LYSMD4-202ENST00000344791 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
LYSMD4-202ENST00000344791 SNCGO76070 127 aa13.47□□□□□ -0.25
LYSMD4-202ENST00000344791 RNASE1P07998 156 aaKnown RBP13.47□□□□□ -0.25
LYSMD4-202ENST00000344791 TTC32Q5I0X7 151 aa13.46□□□□□ -0.25
LYSMD4-202ENST00000344791 TEX29Q8N6K0 151 aa13.46□□□□□ -0.25
LYSMD4-202ENST00000344791 PFN2P35080 140 aa13.46□□□□□ -0.25
LYSMD4-202ENST00000344791 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.25
LYSMD4-202ENST00000344791 FHL2Q14192 279 aa13.46□□□□□ -0.26
LYSMD4-202ENST00000344791 DEFB4AO15263 64 aa13.45□□□□□ -0.26
LYSMD4-202ENST00000344791 TRBV6-4A0A1B0GX49 114 aa13.45□□□□□ -0.26
LYSMD4-202ENST00000344791 PF4P02776 101 aa13.45□□□□□ -0.26
LYSMD4-202ENST00000344791 LINC00158P58513 81 aa13.45□□□□□ -0.26
LYSMD4-202ENST00000344791 COX7B2Q8TF08 81 aa13.44□□□□□ -0.26
LYSMD4-202ENST00000344791 TRBV6-8A0A0A6YYG3 113 aa13.44□□□□□ -0.26
LYSMD4-202ENST00000344791 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
LYSMD4-202ENST00000344791 M0QXV9 152 aa13.43□□□□□ -0.26
LYSMD4-202ENST00000344791 C15orf53Q8NAA6 179 aa13.43□□□□□ -0.26
LYSMD4-202ENST00000344791 TENM1Q9UKZ4 2725 aa13.43□□□□□ -0.26
LYSMD4-202ENST00000344791 H3BT86 120 aa13.42□□□□□ -0.26
LYSMD4-202ENST00000344791 RNF183Q96D59 192 aa13.42□□□□□ -0.26
LYSMD4-202ENST00000344791 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
LYSMD4-202ENST00000344791 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
LYSMD4-202ENST00000344791 Q9HAA7 133 aa13.42□□□□□ -0.26
LYSMD4-202ENST00000344791 COX7A2LO14548 114 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 XCL1P47992 114 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 FAM218AQ96MZ4 157 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 ANAPC13Q9BS18 74 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 GYPEP15421 78 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 GAGE2BQ13066 116 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
LYSMD4-202ENST00000344791 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
LYSMD4-202ENST00000344791 OTOGQ6ZRI0 2925 aa13.4□□□□□ -0.26
LYSMD4-202ENST00000344791 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
LYSMD4-202ENST00000344791 HERV-K104P63124 156 aa13.39□□□□□ -0.27
LYSMD4-202ENST00000344791 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
LYSMD4-202ENST00000344791 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
LYSMD4-202ENST00000344791 ATRQ13535 2644 aa13.39□□□□□ -0.27
LYSMD4-202ENST00000344791 LINC00337Q8N6G1 96 aa13.38□□□□□ -0.27
LYSMD4-202ENST00000344791 CITED1Q99966 193 aa13.38□□□□□ -0.27
LYSMD4-202ENST00000344791 CRPP02741 224 aa13.38□□□□□ -0.27
LYSMD4-202ENST00000344791 HILS1P60008 231 aa13.37□□□□□ -0.27
LYSMD4-202ENST00000344791 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
LYSMD4-202ENST00000344791 TRRAPQ9Y4A5 3859 aa13.37□□□□□ -0.27
LYSMD4-202ENST00000344791 COPS9Q8WXC6 57 aa13.36□□□□□ -0.27
LYSMD4-202ENST00000344791 IGHV3OR16-9A0A0B4J2B5 98 aa13.36□□□□□ -0.27
LYSMD4-202ENST00000344791 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 Q8N3U1 123 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 OR13C6PQ8NH95 151 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 BAALC-AS2P0C853 105 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 C6orf226Q5I0X4 101 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 IGLV10-54A0A075B6I4 117 aa13.34□□□□□ -0.27
LYSMD4-202ENST00000344791 LINC00959A0A1B0GUT2 108 aa13.33□□□□□ -0.28
LYSMD4-202ENST00000344791 PAX4O43316 350 aa13.33□□□□□ -0.28
LYSMD4-202ENST00000344791 ATP5G1P05496 136 aa13.33□□□□□ -0.28
LYSMD4-202ENST00000344791 CCL18P55774 89 aa13.33□□□□□ -0.28
LYSMD4-202ENST00000344791 DEFB135Q30KP9 77 aa13.33□□□□□ -0.28
LYSMD4-202ENST00000344791 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
LYSMD4-202ENST00000344791 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
LYSMD4-202ENST00000344791 A0A087WZ39 114 aa13.3□□□□□ -0.28
LYSMD4-202ENST00000344791 SMIM11BQ8TCY0 68 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms