RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 C2orf91Q6ZV80 131 aa9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 SH2D6Q7Z4S9 175 aa9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 VSIG2Q96IQ7 327 aa9.32□□□□□ -0.92
HERPUD1-202ENST00000344114 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
HERPUD1-202ENST00000344114 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-202ENST00000344114 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
HERPUD1-202ENST00000344114 UBE2D1P51668 147 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 SEC11AP67812 179 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 MRPL23Q16540 153 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 C12orf74Q32Q52 190 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 HIGD1BQ9P298 99 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 ICOSQ9Y6W8 199 aa9.3□□□□□ -0.92
HERPUD1-202ENST00000344114 TRAV10A0A0B4J240 114 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 A0A0J9YY99 117 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 TMEM223A0PJW6 202 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 HTN3P15516 51 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 Q6ZTC4 211 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
HERPUD1-202ENST00000344114 H3BNG1 76 aa9.28□□□□□ -0.92
HERPUD1-202ENST00000344114 TIRAPP58753 221 aa9.28□□□□□ -0.92
HERPUD1-202ENST00000344114 GAGE6Q13070 117 aa9.28□□□□□ -0.92
HERPUD1-202ENST00000344114 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
HERPUD1-202ENST00000344114 MYMXA0A1B0GTQ4 84 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 LEPROTO15243 131 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 HERVK_113P63121 156 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 HSD52Q0P140 79 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
HERPUD1-202ENST00000344114 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
HERPUD1-202ENST00000344114 H3BRM9 83 aa9.26□□□□□ -0.93
HERPUD1-202ENST00000344114 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
HERPUD1-202ENST00000344114 BATFQ16520 125 aa9.26□□□□□ -0.93
HERPUD1-202ENST00000344114 A0A1B0GUV1 79 aa9.25□□□□□ -0.93
HERPUD1-202ENST00000344114 ZNF815PA8K554 130 aa9.25□□□□□ -0.93
HERPUD1-202ENST00000344114 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
HERPUD1-202ENST00000344114 LINC00469Q8N7U9 141 aa9.25□□□□□ -0.93
HERPUD1-202ENST00000344114 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
HERPUD1-202ENST00000344114 A0A096LPF7 62 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 J3QQQ9 107 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 LGALS3P17931 250 aaKnown RBP9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 COL5A1-AS1Q5SY13 56 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 BVES-AS1Q5T3Y7 98 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 M0R2N4 97 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 TAL2Q16559 108 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 LINC00242Q5T6M2 205 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 LELP1Q5T871 98 aa9.24□□□□□ -0.93
HERPUD1-202ENST00000344114 IGLV4-60A0A075B6I1 120 aa9.23□□□□□ -0.93
HERPUD1-202ENST00000344114 DEFB131BA0A096LNP1 70 aa9.23□□□□□ -0.93
HERPUD1-202ENST00000344114 IGHV1-58A0A0C4DH39 117 aa9.23□□□□□ -0.93
HERPUD1-202ENST00000344114 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
HERPUD1-202ENST00000344114 HSPG2P98160 4391 aa9.22□□□□□ -0.93
HERPUD1-202ENST00000344114 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
HERPUD1-202ENST00000344114 IGHV3-30-3P0DP02 117 aa9.22□□□□□ -0.93
HERPUD1-202ENST00000344114 Q6ZR54 194 aa9.22□□□□□ -0.93
HERPUD1-202ENST00000344114 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
HERPUD1-202ENST00000344114 TMEM262E9PQX1 116 aa9.21□□□□□ -0.94
HERPUD1-202ENST00000344114 RBX1P62877 108 aa9.21□□□□□ -0.94
HERPUD1-202ENST00000344114 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
HERPUD1-202ENST00000344114 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
HERPUD1-202ENST00000344114 IGHV3-64A0A075B6Q5 118 aa9.2□□□□□ -0.94
HERPUD1-202ENST00000344114 CCL25O15444 150 aa9.2□□□□□ -0.94
HERPUD1-202ENST00000344114 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
HERPUD1-202ENST00000344114 COX6A2Q02221 97 aa9.2□□□□□ -0.94
HERPUD1-202ENST00000344114 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
HERPUD1-202ENST00000344114 IGLV5-39A0A0G2JS06 123 aa9.19□□□□□ -0.94
HERPUD1-202ENST00000344114 A6NDN8 102 aa9.19□□□□□ -0.94
HERPUD1-202ENST00000344114 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
HERPUD1-202ENST00000344114 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
HERPUD1-202ENST00000344114 LINC00959A0A1B0GUT2 108 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 SS18Q15532 418 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 CEND1Q8N111 149 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 HIST1H4GQ99525 98 aa9.17□□□□□ -0.94
HERPUD1-202ENST00000344114 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
HERPUD1-202ENST00000344114 GCSHP23434 173 aa9.16□□□□□ -0.94
HERPUD1-202ENST00000344114 TM2D2Q9BX73 214 aa9.16□□□□□ -0.94
HERPUD1-202ENST00000344114 A0A1B0GV90 55 aa9.15□□□□□ -0.94
HERPUD1-202ENST00000344114 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
HERPUD1-202ENST00000344114 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
HERPUD1-202ENST00000344114 IGHV3OR16-9A0A0B4J2B5 98 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 NDUFA1O15239 70 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 C1orf134Q5TEV5 83 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 UBE2DNLQ8IWF7 75 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
HERPUD1-202ENST00000344114 A0A087WZ39 114 aa9.13□□□□□ -0.95
HERPUD1-202ENST00000344114 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
HERPUD1-202ENST00000344114 FXYD2P54710 66 aa9.13□□□□□ -0.95
HERPUD1-202ENST00000344114 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
HERPUD1-202ENST00000344114 C10orf126Q8N4M7 172 aa9.13□□□□□ -0.95
HERPUD1-202ENST00000344114 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 A6NJY4 79 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
HERPUD1-202ENST00000344114 REG3AQ06141 175 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms