RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 TIMM17BO60830 172 aa17.09■□□□□ 0.33
NELFB-201ENST00000343053 IFITM1P13164 125 aa17.09■□□□□ 0.33
NELFB-201ENST00000343053 TRGV2A0A075B6R0 118 aa17.08■□□□□ 0.33
NELFB-201ENST00000343053 TENM4Q6N022 2769 aa17.08■□□□□ 0.33
NELFB-201ENST00000343053 C15orf53Q8NAA6 179 aa17.07■□□□□ 0.32
NELFB-201ENST00000343053 CDC42SE2Q9NRR3 84 aa17.07■□□□□ 0.32
NELFB-201ENST00000343053 UBE2L6O14933 153 aa17.07■□□□□ 0.32
NELFB-201ENST00000343053 ZNF843Q8N446 348 aa17.07■□□□□ 0.32
NELFB-201ENST00000343053 TOMM7Q9P0U1 55 aa17.06■□□□□ 0.32
NELFB-201ENST00000343053 GAGE2BQ13066 116 aa17.05■□□□□ 0.32
NELFB-201ENST00000343053 GAGE2EQ4V326 116 aa17.05■□□□□ 0.32
NELFB-201ENST00000343053 GAGE2DQ9UEU5 116 aa17.05■□□□□ 0.32
NELFB-201ENST00000343053 B5MCH6 92 aa17.05■□□□□ 0.32
NELFB-201ENST00000343053 GIG44P09565 113 aaPredicted RBP17.05■□□□□ 0.32
NELFB-201ENST00000343053 ITPR2Q14571 2701 aa17.04■□□□□ 0.32
NELFB-201ENST00000343053 F5H768 121 aa17.04■□□□□ 0.32
NELFB-201ENST00000343053 H3BT86 120 aa17.04■□□□□ 0.32
NELFB-201ENST00000343053 DAZ2Q13117 558 aaKnown RBP17.04■□□□□ 0.32
NELFB-201ENST00000343053 DAZ4Q86SG3 579 aaKnown RBP17.04■□□□□ 0.32
NELFB-201ENST00000343053 DAZ3Q9NR90 486 aaKnown RBP17.04■□□□□ 0.32
NELFB-201ENST00000343053 GAGE6Q13070 117 aa17.04■□□□□ 0.32
NELFB-201ENST00000343053 TMEM243Q9BU79 118 aa17.02■□□□□ 0.31
NELFB-201ENST00000343053 TRBV10-1A0A0K0K1A3 114 aa17.01■□□□□ 0.31
NELFB-201ENST00000343053 NHLRC4P0CG21 123 aaPredicted RBP17.01■□□□□ 0.31
NELFB-201ENST00000343053 TRAV25A0A0B4J276 109 aa17■□□□□ 0.31
NELFB-201ENST00000343053 PLAC8L1A1L4L8 177 aa17■□□□□ 0.31
NELFB-201ENST00000343053 TRGV4A0A0C4DH28 118 aa16.98■□□□□ 0.31
NELFB-201ENST00000343053 LINC01600Q96MT4 127 aa16.98■□□□□ 0.31
NELFB-201ENST00000343053 CSDC2Q9Y534 153 aaKnown RBP16.97■□□□□ 0.31
NELFB-201ENST00000343053 IGLV4-60A0A075B6I1 120 aa16.97■□□□□ 0.31
NELFB-201ENST00000343053 FAM218AQ96MZ4 157 aa16.97■□□□□ 0.31
NELFB-201ENST00000343053 COX7A2LO14548 114 aa16.96■□□□□ 0.31
NELFB-201ENST00000343053 NDUFV3P56181 108 aaKnown RBP16.96■□□□□ 0.31
NELFB-201ENST00000343053 C11orf68Q9H3H3 251 aaKnown RBP16.96■□□□□ 0.31
NELFB-201ENST00000343053 LRRC75A-AS1Q8N1F1 130 aa16.95■□□□□ 0.3
NELFB-201ENST00000343053 MIR7-3HGQ8N6C7 128 aa16.94■□□□□ 0.3
NELFB-201ENST00000343053 LINC01006Q8NI28 216 aa16.94■□□□□ 0.3
NELFB-201ENST00000343053 CHCHD5Q9BSY4 110 aa16.93■□□□□ 0.3
NELFB-201ENST00000343053 Q9HAA7 133 aa16.93■□□□□ 0.3
NELFB-201ENST00000343053 FAM19A3Q7Z5A8 133 aa16.93■□□□□ 0.3
NELFB-201ENST00000343053 SHISA2Q6UWI4 295 aa16.93■□□□□ 0.3
NELFB-201ENST00000343053 VWFP04275 2813 aa16.92■□□□□ 0.3
NELFB-201ENST00000343053 TMEM86BQ8N661 226 aa16.92■□□□□ 0.3
NELFB-201ENST00000343053 C16orf74Q96GX8 76 aa16.92■□□□□ 0.3
NELFB-201ENST00000343053 DEFB130BP0DP73 79 aa16.91■□□□□ 0.3
NELFB-201ENST00000343053 DEFB130AP0DP74 79 aa16.91■□□□□ 0.3
NELFB-201ENST00000343053 C5orf38Q86SI9 138 aa16.91■□□□□ 0.3
NELFB-201ENST00000343053 COX7B2Q8TF08 81 aa16.91■□□□□ 0.3
NELFB-201ENST00000343053 ANK3Q12955 4377 aaKnown RBP16.91■□□□□ 0.3
NELFB-201ENST00000343053 CCDC179H3BU77 68 aa16.9■□□□□ 0.3
NELFB-201ENST00000343053 PDZD2O15018 2839 aa16.9■□□□□ 0.3
NELFB-201ENST00000343053 PFN2P35080 140 aa16.89■□□□□ 0.29
NELFB-201ENST00000343053 LINC00158P58513 81 aa16.89■□□□□ 0.29
NELFB-201ENST00000343053 LINC00337Q8N6G1 96 aa16.89■□□□□ 0.29
NELFB-201ENST00000343053 C19orf73Q9NVV2 129 aa16.89■□□□□ 0.29
NELFB-201ENST00000343053 HERV-K104P63124 156 aa16.88■□□□□ 0.29
NELFB-201ENST00000343053 CLPSL2Q6UWE3 100 aa16.88■□□□□ 0.29
NELFB-201ENST00000343053 CFAP161Q6P656 301 aa16.87■□□□□ 0.29
NELFB-201ENST00000343053 A0A096LPF7 62 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 BAALC-AS2P0C853 105 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 CSNK1G2-AS1Q8NCQ2 148 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 SND1-IT1Q9HBX3 110 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 HIVEP2P31629 2446 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 CRPP02741 224 aa16.86■□□□□ 0.29
NELFB-201ENST00000343053 TRBV6-4A0A1B0GX49 114 aa16.85■□□□□ 0.29
NELFB-201ENST00000343053 FHL2Q14192 279 aa16.85■□□□□ 0.29
NELFB-201ENST00000343053 COPS9Q8WXC6 57 aa16.85■□□□□ 0.29
NELFB-201ENST00000343053 IGKV2-28A0A075B6P5 120 aa16.85■□□□□ 0.29
NELFB-201ENST00000343053 IGKV2D-28P01615 120 aa16.85■□□□□ 0.29
NELFB-201ENST00000343053 TRBV6-8A0A0A6YYG3 113 aa16.84■□□□□ 0.29
NELFB-201ENST00000343053 IGLV1-51P01701 117 aa16.84■□□□□ 0.29
NELFB-201ENST00000343053 DEFB121Q5J5C9 76 aa16.84■□□□□ 0.29
NELFB-201ENST00000343053 SMIM20Q8N5G0 67 aa16.83■□□□□ 0.28
NELFB-201ENST00000343053 SMCR5Q8TEV8 140 aa16.83■□□□□ 0.28
NELFB-201ENST00000343053 C22orf24Q9Y442 160 aa16.82■□□□□ 0.28
NELFB-201ENST00000343053 FASNP49327 2511 aaKnown RBP16.8■□□□□ 0.28
NELFB-201ENST00000343053 IGHV3OR16-9A0A0B4J2B5 98 aa16.8■□□□□ 0.28
NELFB-201ENST00000343053 A0A087WYN8 130 aa16.8■□□□□ 0.28
NELFB-201ENST00000343053 FAM240AA0A1B0GVK7 77 aa16.8■□□□□ 0.28
NELFB-201ENST00000343053 XCL1P47992 114 aa16.8■□□□□ 0.28
NELFB-201ENST00000343053 ATP5G1P05496 136 aa16.79■□□□□ 0.28
NELFB-201ENST00000343053 CCL18P55774 89 aa16.79■□□□□ 0.28
NELFB-201ENST00000343053 KRTAP1-1Q07627 177 aa16.79■□□□□ 0.28
NELFB-201ENST00000343053 SMIM11BQ8TCY0 68 aa16.79■□□□□ 0.28
NELFB-201ENST00000343053 Q6Q795 121 aa16.78■□□□□ 0.28
NELFB-201ENST00000343053 OVOL2Q9BRP0 275 aa16.78■□□□□ 0.28
NELFB-201ENST00000343053 HELZ2Q9BYK8 2649 aaKnown RBP16.78■□□□□ 0.28
NELFB-201ENST00000343053 TRACP01848 142 aa16.78■□□□□ 0.28
NELFB-201ENST00000343053 NOTCH2Q04721 2471 aa16.77■□□□□ 0.28
NELFB-201ENST00000343053 TRAV13-2A0A0B4J235 113 aa16.77■□□□□ 0.27
NELFB-201ENST00000343053 C9orf129Q5T035 196 aaKnown RBP16.76■□□□□ 0.27
NELFB-201ENST00000343053 C3orf56Q8N813 242 aa16.76■□□□□ 0.27
NELFB-201ENST00000343053 GYPEP15421 78 aa16.76■□□□□ 0.27
NELFB-201ENST00000343053 OR13C6PQ8NH95 151 aa16.76■□□□□ 0.27
NELFB-201ENST00000343053 PAX4O43316 350 aa16.75■□□□□ 0.27
NELFB-201ENST00000343053 GAGE2AQ6NT46 116 aa16.75■□□□□ 0.27
NELFB-201ENST00000343053 FAM110AQ9BQ89 295 aa16.74■□□□□ 0.27
NELFB-201ENST00000343053 RPL28P46779 137 aaKnown RBP16.74■□□□□ 0.27
NELFB-201ENST00000343053 UNC79Q9P2D8 2635 aa16.74■□□□□ 0.27
NELFB-201ENST00000343053 LINC00959A0A1B0GUT2 108 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms