RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FAM240AA0A1B0GVK7 77 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 PRR9Q5T870 116 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 EIF4EBP1Q13541 118 aaPredicted RBP6.51□□□□□ -1.37
RTN3-202ENST00000339997 DAZAP2Q15038 168 aaPredicted RBP6.51□□□□□ -1.37
RTN3-202ENST00000339997 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 UPK3BQ9BT76 320 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 IGKV2-24A0A0C4DH68 120 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 PIP4P1Q86T03 277 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 IGFL2Q6UWQ7 119 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 Q8N9L7 120 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 UBE2D4Q9Y2X8 147 aa6.51□□□□□ -1.37
RTN3-202ENST00000339997 BPY2O14599 106 aa6.5□□□□□ -1.37
RTN3-202ENST00000339997 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
RTN3-202ENST00000339997 CELSR2Q9HCU4 2923 aa6.5□□□□□ -1.37
RTN3-202ENST00000339997 COL12A1Q99715 3063 aa6.5□□□□□ -1.37
RTN3-202ENST00000339997 A0A0J9YWU9 116 aa6.5□□□□□ -1.37
RTN3-202ENST00000339997 SPRY4Q9C004 299 aa6.5□□□□□ -1.37
RTN3-202ENST00000339997 H3BUA1 57 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 ZFAND2AQ8N6M9 145 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 NDUFA7O95182 113 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 C9orf66Q5T8R8 295 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 TMEM263Q8WUH6 116 aaKnown RBP6.49□□□□□ -1.37
RTN3-202ENST00000339997 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 TRBV6-1A0A0K0K1D8 114 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 Q8NA96 180 aa6.49□□□□□ -1.37
RTN3-202ENST00000339997 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 MAST4O15021 2626 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 F8W735 103 aaPredicted RBP6.48□□□□□ -1.37
RTN3-202ENST00000339997 J3QLI3 93 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 MYCNOSP40205 109 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 CFAP126Q5VTH2 177 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 V9GYY9 64 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 CENPEQ02224 2701 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 ZNF580Q9UK33 172 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 C16orf74Q96GX8 76 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 TMEM223A0PJW6 202 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 WFDC10AQ9H1F0 79 aa6.48□□□□□ -1.37
RTN3-202ENST00000339997 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 M0QY20 66 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 EDN2P20800 178 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 C6orf99Q4VX62 202 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 A0A087WVE0 104 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 UQCRQO14949 82 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 LMO4P61968 165 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 NRACQ8N912 160 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 RETNQ9HD89 108 aa6.47□□□□□ -1.37
RTN3-202ENST00000339997 LRP4O75096 1905 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 A0A087WZ39 114 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 LOC100131303A0A0U1RQF7 123 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 A6NED7 52 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 C19orf84I3L1E1 186 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 C1orf158Q8N1D5 194 aa6.46□□□□□ -1.37
RTN3-202ENST00000339997 RNASE3P12724 160 aaKnown RBP6.46□□□□□ -1.38
RTN3-202ENST00000339997 CXCL5P42830 114 aa6.46□□□□□ -1.38
RTN3-202ENST00000339997 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
RTN3-202ENST00000339997 LINC00482Q8N8I6 264 aa6.46□□□□□ -1.38
RTN3-202ENST00000339997 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
RTN3-202ENST00000339997 AKAP13Q12802 2813 aa6.45□□□□□ -1.38
RTN3-202ENST00000339997 K7EMT4 169 aa6.45□□□□□ -1.38
RTN3-202ENST00000339997 UBE2D1P51668 147 aa6.45□□□□□ -1.38
RTN3-202ENST00000339997 FAM222AQ5U5X8 452 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 IGKV2-28A0A075B6P5 120 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 TRBV10-1A0A0K0K1A3 114 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 IGKV2D-28P01615 120 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 LINC00694P0DN24 101 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 C18orf65Q6ZTR6 163 aa6.44□□□□□ -1.38
RTN3-202ENST00000339997 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 K7EQG2 157 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 REG3AQ06141 175 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 COL27A1Q8IZC6 1860 aaPredicted RBP6.43□□□□□ -1.38
RTN3-202ENST00000339997 H7C423 109 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 M0QXV9 152 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 MED14OSP0DP75 135 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 COX7BP24311 80 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 PRR3P79522 188 aaKnown RBP6.43□□□□□ -1.38
RTN3-202ENST00000339997 Q6ZQY7 126 aa6.43□□□□□ -1.38
RTN3-202ENST00000339997 CHCHD10Q8WYQ3 142 aaPredicted RBP6.43□□□□□ -1.38
RTN3-202ENST00000339997 A6NDX4 124 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 DEFB113Q30KQ7 82 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 U3KQK5 164 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 MAP1AP78559 2803 aaPredicted RBP6.42□□□□□ -1.38
RTN3-202ENST00000339997 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 LINC00574Q9H8X3 128 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 TRBV30A0A0K0K1B3 111 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 ODF3BA8MYP8 253 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 CCKP06307 115 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 UBE2D3P61077 147 aa6.42□□□□□ -1.38
RTN3-202ENST00000339997 UFSP1Q6NVU6 142 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms