RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 UBE2D1P51668 147 aa11.63□□□□□ -0.55
CCNY-202ENST00000339497 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCNY-202ENST00000339497 POM121L12Q8N7R1 296 aa11.63□□□□□ -0.55
CCNY-202ENST00000339497 UBE2D3P61077 147 aa11.63□□□□□ -0.55
CCNY-202ENST00000339497 UBE2D2P62837 147 aa11.63□□□□□ -0.55
CCNY-202ENST00000339497 C1orf158Q8N1D5 194 aa11.63□□□□□ -0.55
CCNY-202ENST00000339497 SLPIP03973 132 aa11.62□□□□□ -0.55
CCNY-202ENST00000339497 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
CCNY-202ENST00000339497 RBM3P98179 157 aaKnown RBP11.62□□□□□ -0.55
CCNY-202ENST00000339497 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
CCNY-202ENST00000339497 USP24Q9UPU5 2620 aa11.61□□□□□ -0.55
CCNY-202ENST00000339497 IGLV2-18A0A075B6J9 118 aa11.61□□□□□ -0.55
CCNY-202ENST00000339497 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
CCNY-202ENST00000339497 TRBV30A0A0K0K1B3 111 aa11.61□□□□□ -0.55
CCNY-202ENST00000339497 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
CCNY-202ENST00000339497 TMEM256-PLSCR3K7ERE1 68 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 MGAQ8IWI9 3026 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 IGLV1-51P01701 117 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 F8P00451 2351 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 MT-ATP8P03928 68 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 LINC00242Q5T6M2 205 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
CCNY-202ENST00000339497 IGLV4-69A0A075B6H9 119 aa11.59□□□□□ -0.55
CCNY-202ENST00000339497 A0A1B0GX51 115 aa11.59□□□□□ -0.55
CCNY-202ENST00000339497 COX7BP24311 80 aa11.58□□□□□ -0.56
CCNY-202ENST00000339497 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
CCNY-202ENST00000339497 SHISA2Q6UWI4 295 aa11.58□□□□□ -0.56
CCNY-202ENST00000339497 NREPQ16612 68 aa11.58□□□□□ -0.56
CCNY-202ENST00000339497 LINC00694P0DN24 101 aa11.57□□□□□ -0.56
CCNY-202ENST00000339497 Q6ZSN1 163 aa11.57□□□□□ -0.56
CCNY-202ENST00000339497 CITED1Q99966 193 aa11.57□□□□□ -0.56
CCNY-202ENST00000339497 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
CCNY-202ENST00000339497 TIMM17BO60830 172 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 CD164L2Q6UWJ8 174 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 CLUHP3Q96NS8 147 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 SS18L2Q9UHA2 77 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 MUC4Q99102 2169 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 PRB2P02812 416 aaPredicted RBP11.56□□□□□ -0.56
CCNY-202ENST00000339497 KPRPQ5T749 579 aaPredicted RBP11.56□□□□□ -0.56
CCNY-202ENST00000339497 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
CCNY-202ENST00000339497 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
CCNY-202ENST00000339497 CDH23Q9H251 3354 aa11.55□□□□□ -0.56
CCNY-202ENST00000339497 IGHV4-30-4P0DP06 118 aa11.55□□□□□ -0.56
CCNY-202ENST00000339497 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
CCNY-202ENST00000339497 SPATA25Q9BR10 227 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 ATOX1O00244 68 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 UBE2AP49459 152 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 COX6A2Q02221 97 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 LELP1Q5T871 98 aa11.52□□□□□ -0.57
CCNY-202ENST00000339497 HIGD2AQ9BW72 106 aa11.51□□□□□ -0.57
CCNY-202ENST00000339497 LST1O00453 97 aa11.5□□□□□ -0.57
CCNY-202ENST00000339497 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
CCNY-202ENST00000339497 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
CCNY-202ENST00000339497 H3BQ85 93 aa11.49□□□□□ -0.57
CCNY-202ENST00000339497 BEAN1Q3B7T3 259 aa11.49□□□□□ -0.57
CCNY-202ENST00000339497 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
CCNY-202ENST00000339497 SMIM11BQ8TCY0 68 aa11.48□□□□□ -0.57
CCNY-202ENST00000339497 AMELXQ99217 191 aa11.48□□□□□ -0.57
CCNY-202ENST00000339497 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
CCNY-202ENST00000339497 FHL2Q14192 279 aa11.48□□□□□ -0.57
CCNY-202ENST00000339497 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
CCNY-202ENST00000339497 MGAM2Q2M2H8 2515 aa11.47□□□□□ -0.57
CCNY-202ENST00000339497 RETNQ9HD89 108 aa11.47□□□□□ -0.57
CCNY-202ENST00000339497 ZNF292O60281 2723 aa11.47□□□□□ -0.57
CCNY-202ENST00000339497 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
CCNY-202ENST00000339497 NANOS2P60321 138 aaKnown RBP11.46□□□□□ -0.57
CCNY-202ENST00000339497 RNF183Q96D59 192 aa11.46□□□□□ -0.57
CCNY-202ENST00000339497 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.58
CCNY-202ENST00000339497 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.58
CCNY-202ENST00000339497 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 NDUFS5O43920 106 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 LINC00315P59091 139 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 PDE6GP18545 87 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
CCNY-202ENST00000339497 A0A096LNI7 61 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 UNQ6190/PRO20217Q6UXQ8 127 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 Q6ZQY7 126 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 CYSRT1A8MQ03 144 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
CCNY-202ENST00000339497 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 FAM19A5Q7Z5A7 132 aaPredicted RBP11.44□□□□□ -0.58
CCNY-202ENST00000339497 Q8IZM0 81 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
CCNY-202ENST00000339497 NDUFV3P56181 108 aaKnown RBP11.44□□□□□ -0.58
CCNY-202ENST00000339497 MAP1AP78559 2803 aaPredicted RBP11.43□□□□□ -0.58
CCNY-202ENST00000339497 A0A087WZ39 114 aa11.42□□□□□ -0.58
CCNY-202ENST00000339497 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
CCNY-202ENST00000339497 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
CCNY-202ENST00000339497 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
CCNY-202ENST00000339497 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
CCNY-202ENST00000339497 CSDC2Q9Y534 153 aaKnown RBP11.41□□□□□ -0.58
CCNY-202ENST00000339497 Q9UF83 564 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms