RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 K7EIL1 84 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
HPS1-202ENST00000338546 TMEM238C9JI98 176 aa11.23□□□□□ -0.61
HPS1-202ENST00000338546 MDFIQ99750 246 aa11.23□□□□□ -0.61
HPS1-202ENST00000338546 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
HPS1-202ENST00000338546 A0A0J9YXY3 114 aa11.22□□□□□ -0.61
HPS1-202ENST00000338546 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
HPS1-202ENST00000338546 Q6ZVH6 145 aa11.22□□□□□ -0.61
HPS1-202ENST00000338546 C10orf126Q8N4M7 172 aa11.22□□□□□ -0.61
HPS1-202ENST00000338546 A0A1B0GWB2 263 aa11.21□□□□□ -0.61
HPS1-202ENST00000338546 NDUFA1O15239 70 aa11.21□□□□□ -0.61
HPS1-202ENST00000338546 TIMM17BO60830 172 aa11.21□□□□□ -0.61
HPS1-202ENST00000338546 C11orf45Q8TAV5 145 aa11.21□□□□□ -0.61
HPS1-202ENST00000338546 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 C9orf118A6NHY6 69 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 SS18Q15532 418 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 Q6ZTC4 211 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 LINC01561Q8N1V8 128 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 IGHV3OR16-9A0A0B4J2B5 98 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
HPS1-202ENST00000338546 LYPD5Q6UWN5 251 aa11.19□□□□□ -0.62
HPS1-202ENST00000338546 A0A087WZ39 114 aa11.18□□□□□ -0.62
HPS1-202ENST00000338546 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
HPS1-202ENST00000338546 K7EP13 123 aa11.17□□□□□ -0.62
HPS1-202ENST00000338546 HERV-K104P63124 156 aa11.17□□□□□ -0.62
HPS1-202ENST00000338546 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
HPS1-202ENST00000338546 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
HPS1-202ENST00000338546 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
HPS1-202ENST00000338546 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
HPS1-202ENST00000338546 NOTCH1P46531 2555 aa11.16□□□□□ -0.62
HPS1-202ENST00000338546 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
HPS1-202ENST00000338546 RPL24P83731 157 aaKnown RBP11.16□□□□□ -0.62
HPS1-202ENST00000338546 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
HPS1-202ENST00000338546 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
HPS1-202ENST00000338546 LITAFQ99732 161 aa11.16□□□□□ -0.62
HPS1-202ENST00000338546 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
HPS1-202ENST00000338546 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
HPS1-202ENST00000338546 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
HPS1-202ENST00000338546 ZNF625Q96I27 306 aaPredicted RBP11.15□□□□□ -0.62
HPS1-202ENST00000338546 IFITM1P13164 125 aa11.14□□□□□ -0.63
HPS1-202ENST00000338546 LINC00269Q8N2A0 174 aa11.14□□□□□ -0.63
HPS1-202ENST00000338546 Q9H8V8 135 aa11.14□□□□□ -0.63
HPS1-202ENST00000338546 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 ANGP03950 147 aaKnown RBP11.13□□□□□ -0.63
HPS1-202ENST00000338546 REG3AQ06141 175 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 VAMP3Q15836 100 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
HPS1-202ENST00000338546 MIAQ16674 131 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 COPS9Q8WXC6 57 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 PPDPFQ9H3Y8 114 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
HPS1-202ENST00000338546 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
HPS1-202ENST00000338546 H3BUT2 72 aa11.11□□□□□ -0.63
HPS1-202ENST00000338546 K7ERJ3 54 aa11.11□□□□□ -0.63
HPS1-202ENST00000338546 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
HPS1-202ENST00000338546 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
HPS1-202ENST00000338546 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
HPS1-202ENST00000338546 A0A1W2PPM0 123 aa11.1□□□□□ -0.63
HPS1-202ENST00000338546 IGLL5B9A064 214 aa11.1□□□□□ -0.63
HPS1-202ENST00000338546 XCL1P47992 114 aa11.1□□□□□ -0.63
HPS1-202ENST00000338546 MRAPQ8TCY5 172 aa11.1□□□□□ -0.63
HPS1-202ENST00000338546 FABP2P12104 132 aa11.09□□□□□ -0.63
HPS1-202ENST00000338546 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
HPS1-202ENST00000338546 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
HPS1-202ENST00000338546 C5orf38Q86SI9 138 aa11.09□□□□□ -0.63
HPS1-202ENST00000338546 CHCHD10Q8WYQ3 142 aaPredicted RBP11.09□□□□□ -0.63
HPS1-202ENST00000338546 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
HPS1-202ENST00000338546 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 A4D1N5 150 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 COX7A2LO14548 114 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 PRSS2P07478 247 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 CFC1BP0CG36 223 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 CFC1P0CG37 223 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 Q8IZM0 81 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 ESRGQ1W209 222 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
HPS1-202ENST00000338546 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
HPS1-202ENST00000338546 CLPSL2Q6UWE3 100 aa11.06□□□□□ -0.64
HPS1-202ENST00000338546 B9D2Q9BPU9 175 aa11.06□□□□□ -0.64
HPS1-202ENST00000338546 PRO1854Q9UHT4 67 aa11.06□□□□□ -0.64
HPS1-202ENST00000338546 K7EP34 96 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 APOMO95445 188 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 Q8N3U1 123 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 TOMM7Q9P0U1 55 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
HPS1-202ENST00000338546 IBA57-AS1B1ANH7 110 aa11.04□□□□□ -0.64
HPS1-202ENST00000338546 CXCL5P42830 114 aa11.04□□□□□ -0.64
HPS1-202ENST00000338546 C6orf226Q5I0X4 101 aa11.04□□□□□ -0.64
HPS1-202ENST00000338546 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
HPS1-202ENST00000338546 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
HPS1-202ENST00000338546 CRPP02741 224 aa11.03□□□□□ -0.64
HPS1-202ENST00000338546 FOXI1Q12951 378 aa11.03□□□□□ -0.64
HPS1-202ENST00000338546 LINC01556Q5JQF7 62 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms